Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02463 ATTATATCCATCGCCATGCGTTGGTTCCCCACCCTCATCTTCTCCCATTCCAATTCCCATTCCAATTCCCATTCCCATTCTCATTCTCATTCTCATCCATCCTCGTCATCAACATCAACATCAACATCAACATCAACGTCGTCATCATCTTCGACGATTCTACAGTCTTGCCCTTACGGTCACGGTGGCGACCACAGGAAGAACAGCCGCTCCTCCGGGTGGTTGTTCGGTAGTGGAAAAAGGTGGACGCGGACCAGGAGATTGAACCACGTGGCAAACATAGATAACATGGTTGTTCCTCCCTTGTCTCGCTCCTCTAGCACGTATGAACGTTCCTCTGTTGAGCCAGAGCCTCAACCATTACCCTTGCCTAGAGATGCCGATTACCGTATTCCTTCGCCCAAAGATCCTGTCAACAAACCTGCCCCCTTTGATGTTACCCTCCCCCCTGGTTTTCGCATGCGCAGTTTAAATGAAGCACATGATTTGTGTAATGACATCTGCATTTGTTTGAACAGTGTTTTTGCGAGCCAAGAGACAAGAAAAAATACTGAGGCAAGGTTGATAGGAGGGGTGGTGCCTCAACAAGAGTTGAGTAGTGGTGTAAGTACAAGCACTCAAGGAGATAACTTCTGGTTGAGTAACGCTGCTAGAAGTGCTCCAACCAGTCCTTTTGCCAGTCCCAAAATAAGCCCATTGAATACTAATAAAAACGATGATTTTGTCCCATACTATTACGTGTCACCCAAAGGAAACCAGTTTTGGTCAGCACCAGAGATGTCCACACCTGACCCTTCACTTGGACACATATCTCCTGCTTTCTTTGATTTATCTGTATTACGCACTGATAACACTCCTTCTCCCCATCAAAGCCCCAAAGGAAAAAGCCCTACCCGACACCCTAAGAGCCCAACTGGGCCTTCTTCTTTTTCTTCTCCATCCATAACCCCAAGGTTATCCCTTGACACCCCAATGGCTACACGACGTGAAACCGCTGCTCCTCTCGCTGTCCACCCCTTACCCTTACCTCCTTGGGCTGGGCCTGGGGCTCCCTTACTTTCACCGTCTTCTACCTTTTCCCCACCTGTGGCCAAGACAGAATCCTTTCCAATGAAAAACCAATGGCAAAAAGGGAAACTTATTGGCCGAGGTACTTTTGGAACTGTTTATGTTGCCACTAATAGAAAAACCGGAGCATTGTGTGCAATGAAGGAAGTAGAAATCTTTTCCGATGATCCAAAATCCGCAGAGTGCATAAAGCAATTAGAGCAGGAAATTAAAGTTCTTAGTCATCTGAAACATCCAAACATCGTACAGGACATCAAAGGGGCTAATTTGCTCGTTGATTCTGCTGGTGTTGTTAAGCTTGCTGACTTTGGGATGGCGAAACATTTAACTGGACATGTTACAGATCTTTCTTTGAAGGGAAGTCCGTATTGGATGGCTCCAGAGCTTATGCAAACAGTTGTCCAAAAAGATAACAACTCTGATCTAGCTTTTGCCGTTGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTCACAGGAAAGCCTCCTTGGAGTGAATACGAAGGAGCTGCAGCTATGTTTAAGGTTATGAAGGATACACCTCCTATACCAGAAACATTGTCAGTCGAGGGTAAAGATTTCCTGAGACTTTGCTTTATAAGAAATCCAGCAGAGCGACCAACTGCTTTAATGTTACTAGAGCATCGATTCCTAAAAGACTTACGACAACCAGATGTTTCAACTTCCATGCACATATATAATGGGACATCCATGATGGATATTCATAGTCCCAGGGAGCAATTTGATAATAAATCTAATCAAATTTCCATTCCCAGTGCTCCAATTGCTAAAGGAAAATTAGCCATCGAG 1881 0.4482 IISIAMRWFPTLIFSHSNSHSNSHSHSHSHSHPSSSSTSTSTSTSTSSSSSTILQSCPYGHGGDHRKNSRSSGWLFGSGKRWTRTRRLNHVANIDNMVVPPLSRSSSTYERSSVEPEPQPLPLPRDADYRIPSPKDPVNKPAPFDVTLPPGFRMRSLNEAHDLCNDICICLNSVFASQETRKNTEARLIGGVVPQQELSSGVSTSTQGDNFWLSNAARSAPTSPFASPKISPLNTNKNDDFVPYYYVSPKGNQFWSAPEMSTPDPSLGHISPAFFDLSVLRTDNTPSPHQSPKGKSPTRHPKSPTGPSSFSSPSITPRLSLDTPMATRRETAAPLAVHPLPLPPWAGPGAPLLSPSSTFSPPVAKTESFPMKNQWQKGKLIGRGTFGTVYVATNRKTGALCAMKEVEIFSDDPKSAECIKQLEQEIKVLSHLKHPNIVQDIKGANLLVDSAGVVKLADFGMAKHLTGHVTDLSLKGSPYWMAPELMQTVVQKDNNSDLAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSVEGKDFLRLCFIRNPAERPTALMLLEHRFLKDLRQPDVSTSMHIYNGTSMMDIHSPREQFDNKSNQISIPSAPIAKGKLAIE 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02463 627 Gene3D Transferase(Phosphotransferase) domain 1 443 614 - -
Pste1g02463 627 SUPERFAMILY Protein kinase-like (PK-like) 360 611 IPR011009 -
Pste1g02463 627 ProSiteProfiles Protein kinase domain profile. 299 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02463 627 MobiDBLite consensus disorder prediction 19 57 - -
Pste1g02463 627 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 440 588 - -
Pste1g02463 627 ProSitePatterns Protein kinases ATP-binding region signature. 381 404 IPR017441 GO:0005524
Pste1g02463 627 MobiDBLite consensus disorder prediction 280 320 - -
Pste1g02463 627 Gene3D Phosphorylase Kinase; domain 1 366 442 - -
Pste1g02463 627 SMART serkin_6 375 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02463 627 MobiDBLite consensus disorder prediction 19 73 - -
Pste1g02463 627 MobiDBLite consensus disorder prediction 100 126 - -
Pste1g02463 627 Pfam Protein kinase domain 440 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02463 627 Pfam Protein kinase domain 376 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02463 627 MobiDBLite consensus disorder prediction 100 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02463 Pste-Chr1 8997891 9001848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02463 429 612 MAP Kinase Kinase Kinase AT5G66850 70.681 6.23e-83 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pste1g02463 Pkinase 5.8e-30 CL0016