Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02459 AAAGCATCACAGTAGATTTAAAAGTGAATATGAGAAAGGAAGATGATTGTAAAGAGGATCAACTTGCTTTGGACATGAAGAATTTAAATTTAAAAGAGGAAGTTTCTCAGAATGGAATAAATAATGGCAATCAGACACAAACATTTAATTTTAATGAGCTTGAAGATGCAACAAGAAACTTTAAATTAGATTTATGCTTAGGAGAAGGAGGCTTTGGCAAGGTTTACAAGGGACACTTACAAAAAGTAAACCAGGTTGTAGCTATAAAGAAATTGAACCTTAATGGACTTCAAGGAGTTCGAGAATTTGTTGTTGAAGTGTTAACATTAAGTTTGGCAAATCACCCTAATCTTGTCAAATTGATTGGATTCTGTGCTGAGGGAGAACAAAGACTATTAGTTTATGAGTACATGCCATTAGGATCTTTAGAGAATAATTTACTTGGTAAATTATATCTTATTAATCTTTCATATATTGCAAAACCCTTTCTTAGAGATAGGAGAAAATTTTCCCAAATGGTTGATCCATTGCTTAAAGGTCAATATCCTATGAGAGGCTTATACCAAGCTCTTGCAATTGTTGTTATGTGTGTTCAAGAGAAACCTAATATGCGGCCTGATATAGTTGATGTAGTTACAGCTCTAGATTATATTGTTTCTCAAGATTATGATCATCAACTTCATCCAATGCAATGCCCTAGGAAAAGTCCACATTCTCATATAGTGAAAAAAGATGATGATGATTATAGA 749 0.3271 MRKEDDCKEDQLALDMKNLNLKEEVSQNGINNGNQTQTFNFNELEDATRNFKLDLCLGEGGFGKVYKGHLQKVNQVVAIKKLNLNGLQGVREFVVEVLTLSLANHPNLVKLIGFCAEGEQRLLVYEYMPLGSLENNLLGKLYLINLSYIAKPFLRDRRKFSQMVDPLLKGQYPMRGLYQALAIVVMCVQEKPNMRPDIVDVVTALDYIVSQDYDHQLHPMQCPRKSPHSHIVKKDDDDYR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02459 240 Gene3D Transferase(Phosphotransferase) domain 1 134 223 - -
Pste1g02459 240 SUPERFAMILY Protein kinase-like (PK-like) 41 223 IPR011009 -
Pste1g02459 240 SMART serkin_6 51 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02459 240 ProSiteProfiles Protein kinase domain profile. 51 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02459 240 ProSitePatterns Protein kinases ATP-binding region signature. 57 81 IPR017441 GO:0005524
Pste1g02459 240 Gene3D Phosphorylase Kinase; domain 1 21 127 - -
Pste1g02459 240 FunFam probable serine/threonine-protein kinase RLCKVII 22 127 - -
Pste1g02459 240 PANTHER OS07G0668900 PROTEIN 145 216 - -
Pste1g02459 240 Pfam Protein tyrosine and serine/threonine kinase 54 139 IPR001245 GO:0004672|GO:0006468
Pste1g02459 240 MobiDBLite consensus disorder prediction 219 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02459 Pste-Chr1 8981449 8984702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02459 145 208 Glycoside Hydrolase AT3G07070 40.625 4.46e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pste1g02459 PK_Tyr_Ser-Thr 8.5e-16 CL0016