Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02450 CATTTTTGTAGGAAACGATGTTTCTCTCTGCTCACATCATCAGTCCCCAGCATTGTTAAGCAACACACTCCCCACGATCATCCAACGTACCTTAATTCTCACAAACTACACATTTCAATTTCAACAACTCGGCCCCAGAAAGGAAGAGCTTCTCACTTCAAACCTCTTACAATGCTTTGACCTCCACTCTCCACTCTCCACTCTCCACTCCACTCTCCACTCTCCACTCTCCACTCATGGGTGTCTGCACTTCCAAACCCACTCTCTCCTCTCCTCAATCCTCCCCGTCGGCTCCAACTCAAAACGACGTCGTCACACTCACTCACACTGCCGAGCCTCACGCCACCAATGCCCAAACCCAAAACCCTAATGAGCCCGACAAAGTTAAGAGATCTCCGTTCTACACTCCCAGTCCGGGCCGCTATATGTTCCCGGTCTCCCCGCGCCGCTTCTTCAAGCGCCCGTTTCCGCCGCCTTCGCCGGCCAAGCACATAAAGGCGGCGCTGGCGCGGCGGCACGGCTCGGTCAAGCCCAACGAGCCTTCCATACCGGAGGGGGAGACGGTCGCCGGGCTCGATAGGAACTTCGGATTCTCCAAGCATTTCGGAAATAAATACGAGGTTGGAGATGAGGTTGGGAGAGGCCACTTTGGATACACTTGCGTTGCCAAGGTGAAGAAAGGGGACCTGAAGGGGCAACAAGTGGCCGTTAAAGTCATTCCAAAAGCCAAGATGACCACTGCAATTGCTATCGAGGATGTGAGAAGAGAAGTAAAAATATTGAGAGCTTTGACTGGACATAAGAATCTAGTACAATTCTATGATGCATATGAAGACCATGATAATGTCTATATAGTTATGGAGTTGTGTGAAGGAGGAGAGCTGTTAGACAGAATATTATCAAGAGGTGGGAAGTACACAGAGGAAGATGCAAAAGCTGTCCTGAGACAAATACTGAATGTTGTTGCCTTTTGCCATCTACAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTCTTATTCACATCCAAGGATGAGAACTCAAAGTTGAAGGCCATAGACTTTGGGTTGTCAGATTTTGTTAAACCAGATGAAAGACTTAATGATATTGTTGGCAGTGCATACTACGTTGCACCTGAAGTTCTTCATCGAGCTTACAGTACAGAGGCTGATGTCTGGAGTATCGGGGTGATTGCATACATTTTATTATGTGGGAGCCGTCCCTTTTGGGCCCGGACAGAGTCTGGTATCTTTCGTGCAGTACTGAAGGCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTCTGTCAGATGAGGCAACAGATTTTGTTAAGCGATTACTAAATAAAGATCCACGGAAAAGAATGTCTGCAGCACAGGCATTAAGTCATCCATGGATTAAAAACAAGGATGTAAAAGTACCTCTGGACATTCTCATATTAAAGCTCATGAGGGCATACATGCGTTCCTCATCACTACGAAAAGCAGCTTTAAGGGCTCTGTCTAAGACATTAACTGTTGATGAACTATTTTATTTGAGGGAGCAGTTTGCACTTTTAGAGCCAAGCAAAAATGGCACCCTTAGCTTGGAAAATATCAAAGCGGTGTTGATGGTAAATGCAACAGATGCTATGAAGGAGTCACGCATACCTGACTTTTTGGCATCATTTCGATGCCAGCTTAACGCATTACAATATAAAAGGATGGATTTTGATGAGTTCTGTGCAGCAACACTTAGTGTTCATCAACTTGAAACACTTGACCAGTGGGAACAAAATGCACGTTGTGCCTATGACCTTTTTGAAAAGGATGGAAACAAGGCCATAGTCATTGACGAACTAGCTTCGGAGCTTGGGCTTGGTCCATCTCTCCCTGTTCATGCTGTTCTCCATGATTGGATTCGGCACACTGATGGAAAGTTAAGTTTCCTTGGATTTGTCAAACTGTTGCATGGCCCATCTAGAAGTCTTGCAAAAGCTCAATAGAGCTCAGAAGCCCAAAAGATGATCAATATGGCTCAAAAGGCTACACTGTAAAGCATTAGCGCGTTAAAAGGCTACGCTTAATACTGTAACATGTTAGAAGATTCACTATTGAGGTGTGCCATTCTTGTGATCTTGTCCATAGGCAAATTCTTTACCTTATTATATCCAGAGCTGAAGGAGAAGGTTTTGGGGTCCTTTCGACCTTTCAACAATATTGTAGCTTTTGGGAATTTTAACTTTGATTTTTCTTGGATGCTTTTCTCACCATTTGAGGGTGTTGATCATGTTGATAATGGGCTGAAGCAGGAAATGTGAACTACTTGTAGCCTTGGATCATGAAAATTACAGAGGATCCAAGCCGTCAAAAATAGTTTGACCTGTAAAGAAAAAAATTATAAATACTTATAAAATTATCCTCTGTTGACTGTTGCAATAAATTGTAGATATCG 2437 0.4428 MGVCTSKPTLSSPQSSPSAPTQNDVVTLTHTAEPHATNAQTQNPNEPDKVKRSPFYTPSPGRYMFPVSPRRFFKRPFPPPSPAKHIKAALARRHGSVKPNEPSIPEGETVAGLDRNFGFSKHFGNKYEVGDEVGRGHFGYTCVAKVKKGDLKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVLRQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSKLKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSDEATDFVKRLLNKDPRKRMSAAQALSHPWIKNKDVKVPLDILILKLMRAYMRSSSLRKAALRALSKTLTVDELFYLREQFALLEPSKNGTLSLENIKAVLMVNATDAMKESRIPDFLASFRCQLNALQYKRMDFDEFCAATLSVHQLETLDQWEQNARCAYDLFEKDGNKAIVIDELASELGLGPSLPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02450 583 Pfam Protein kinase domain 127 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02450 583 MobiDBLite consensus disorder prediction 1 48 - -
Pste1g02450 583 Gene3D Transferase(Phosphotransferase) domain 1 217 407 - -
Pste1g02450 583 PANTHER SERINE/THREONINE-PROTEIN KINASE 113 558 - -
Pste1g02450 583 FunFam CDPK-related kinase 3 119 291 - -
Pste1g02450 583 MobiDBLite consensus disorder prediction 1 61 - -
Pste1g02450 583 Gene3D - 408 501 - -
Pste1g02450 583 FunFam CDPK-related kinase 1 120 215 - -
Pste1g02450 583 SUPERFAMILY Protein kinase-like (PK-like) 124 417 IPR011009 -
Pste1g02450 583 ProSitePatterns Protein kinases ATP-binding region signature. 133 159 IPR017441 GO:0005524
Pste1g02450 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Pste1g02450 583 SUPERFAMILY EF-hand 416 574 IPR011992 -
Pste1g02450 583 FunFam Calcium-dependent protein kinase SK5 299 394 - -
Pste1g02450 583 Gene3D Phosphorylase Kinase; domain 1 120 216 - -
Pste1g02450 583 FunFam CDPK-related kinase 1 424 501 - -
Pste1g02450 583 CDD STKc_CAMK 126 388 - -
Pste1g02450 583 ProSiteProfiles Protein kinase domain profile. 127 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02450 583 Gene3D - 413 571 - -
Pste1g02450 583 SMART serkin_6 127 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02450 Pste-Chr1 8920023 8925642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02450 1 583 EF-hand Containing Proteins AT3G50530 71.900 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste1g02450 Pkinase 3.1e-72 CL0016