Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02442 GACGTGTGGGTTTTGAATTTTGTTTTGTTAGGAATCTCACACACTGAAAAATATTAAATACAGGCTTGGCGTGCATTCGCATTCAGTGGTGAAGGAGTATAGTATAGTACTAGGAAGGGGCAGGGGCCTGAAAGCATGTACAGAGAAACACAAGACAAGAATTGTGAGTCCCAGGGGCAGTTTGTGGCATCGACGGTGATGTCGGCAATGCAGTACGGCGGCGGTCCGCAGCAGTTGGAACTGAACTGGGAGGTGAGTTCCAACAATACGTACAGCAGCGGGTGCAGCAGCTACAGCAGCTACATGGGGTCACCCAGTCCACGAGTGCAGAGGAGCGTTAGCAGCCACTCCCTGCACAAGAACACTGGGCCCCACCACCCCTTTTCTCCTCTTTTTCCTCACTCCGTACGCCGAGCTTCCAGTACCGGTGACCTTCAGAGATTCAATGGAATGCAATACTATCATCATTCTGATAGTCCATTGTCAAGTGAAAGCAGTTTAATCATAGAAGAAATGAGCAGAACCAGTCCTTATAGCCCCGAGGAGAAGAAGGTCAGGATTGAGAGATACAGGACCAAGAGAAACCAGAGAAATTTTGCCAAGAAAATTAAGTATGCTTGCAGGAAGACATTGGCAGATAGCAGGCCACGTATCAGAGGACGATTTGCAAGGAATGACGAAATTGCAACGAACCCTCCAGTTCAGTGGAGTCACATGGGTACTGGTGAGGAAGAGGATGAAGAAGAGAATTGGGCCAATTTCTTTGATTCCTTAGTTCCTGCAAACATTGCTCAGGAGCCTCATGGCAGTTCCTCCTTTGGTGTATTCTATTAAAATAATTGCATGCTTAAATCAGCATGGCCAGATAATTAAGTTGTTTGTTTTCCGTGTTTTAAGTTTTGTGGTAGGTAATTAATGTAAATATATATGATGTACTTATTTGAATCATGGACAATGACTATGTGCAGTTTTAGACTTCAATCTGGGGTGAAGTTTTTAGCGCCCTTTTATGTTTTTATATAGACT 1026 0.4464 MYRETQDKNCESQGQFVASTVMSAMQYGGGPQQLELNWEVSSNNTYSSGCSSYSSYMGSPSPRVQRSVSSHSLHKNTGPHHPFSPLFPHSVRRASSTGDLQRFNGMQYYHHSDSPLSSESSLIIEEMSRTSPYSPEEKKVRIERYRTKRNQRNFAKKIKYACRKTLADSRPRIRGRFARNDEIATNPPVQWSHMGTGEEEDEEENWANFFDSLVPANIAQEPHGSSSFGVFY 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02442 232 ProSiteProfiles CCT domain profile. 138 180 IPR010402 GO:0005515
Pste1g02442 232 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 24 206 IPR045281 GO:0009909
Pste1g02442 232 Pfam CCT motif 140 180 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02442 Pste-Chr1 8818910 8821016 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02442 129 179 C2C2-CO-like Transcription Factor Family AT5G24930 50.980 9.78e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste1g02442 CCT 1.4e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03302 3 25627121 25628796 Pste1g02442 1 8818910 8821016 PCT