Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02438 GTATGGGAAGATCTCCATGTTGTGATGAAATTGGTTTGAAGAAAGGTCCTTGGACACCTGAAGAAGATCAGAAGCTTATTAACCACATTCAAAAATATGGCCATGCAAGCTGGAGAGCTCTTCCAAAACTTGCAGGACTCAACAGGTGTGGCAAAAGTTGTAGGTTAAGGTGGACAAACTACTTGAGGCCTGACATTAAAAGAGGCAAGTTTTCCCAAGAAGAAGAACAAACAATTCTGGATCTCCATGCCATCCTTGGAAACAAGTTAATATTCAACACCTTTTTCCTTATATGGTCTGCAATAGCAAGTCACTTACCAGGTAGAACAGATAATGAAATCAAGAATTTTTGGAACACCCATCTCAAGAAGAAGCTGATTCAAATGGGTTATGATCCAATGACACACCAGCCTAGAATTGATGATATATTCTCAAGTTTGTCTCATCTCATAGCACTGGCAAACCTCAAAGAACTCTTGGACCATCACCACCAACCATGGCAACAAAACCTTGCAAGGCTTCAAGAAGAGACCATCAGATTGGCCAGGCTCCAATGCCTACAGCAACACCTCTTGCAGCCACAAGCTTCAATAACTGAAGCAGATCCTAACACAATTAACAGCATAATAAACAGTGCCTTCATAAACAACAAGGACACCACCAATAATAATGTTTCAAATGACCAATTTGAGAACATTAATATTATGTCATCTAACGCAATTGGAAATATCCAATTTGGTGATGATTCAATCCCTTTCTCTCACATGCCTGAGTTGAAAACACCACCTTCTTGTTCCTATAAAGCACCATCATCAAGTAATAAGGACATGGTTAAATTTTCTGAAGGAGAAAGTTATCCCAATTCTCCGTGGCTTCTTTCATGTTCAAGCACCACCCCTTCTTCTCCTTCTCAATTGGTTCCTCCTGTCACTGAGGTTTCATTGACTAACATGGAAGATAATTGCACTATTTGGCCTGAGCTCTTGCTAGAGGACCCTTTGTTCAAAATGATATCC 1016 0.4016 MGRSPCCDEIGLKKGPWTPEEDQKLINHIQKYGHASWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILDLHAILGNKLIFNTFFLIWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMGYDPMTHQPRIDDIFSSLSHLIALANLKELLDHHHQPWQQNLARLQEETIRLARLQCLQQHLLQPQASITEADPNTINSIINSAFINNKDTTNNNVSNDQFENINIMSSNAIGNIQFGDDSIPFSHMPELKTPPSCSYKAPSSSNKDMVKFSEGESYPNSPWLLSCSSTTPSSPSQLVPPVTEVSLTNMEDNCTIWPELLLEDPLFKMIS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02438 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 125 IPR017930 -
Pste1g02438 338 FunFam MYB-related transcription factor 13 66 - -
Pste1g02438 338 Gene3D - 11 67 - -
Pste1g02438 338 SMART sant 66 123 IPR001005 -
Pste1g02438 338 SMART sant 13 63 IPR001005 -
Pste1g02438 338 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 263 - -
Pste1g02438 338 CDD SANT 16 61 IPR001005 -
Pste1g02438 338 FunFam MYB transcription factor 68 138 - -
Pste1g02438 338 SUPERFAMILY Homeodomain-like 11 117 IPR009057 -
Pste1g02438 338 Pfam Myb-like DNA-binding domain 67 121 IPR001005 -
Pste1g02438 338 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste1g02438 338 ProSiteProfiles Myb-like domain profile. 62 121 IPR001005 -
Pste1g02438 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pste1g02438 338 CDD SANT 69 121 IPR001005 -
Pste1g02438 338 Gene3D - 69 125 - -
Pste1g02438 338 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02438 Pste-Chr1 8776342 8777927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02438 1 337 MYB Transcription Factor Family AT5G10280 48.476 4.31e-95 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste1g02438 Myb_DNA-binding 5.4e-14 CL0123