Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02437 ATGTACACACACTCACGCCGCACCAAGTCCCTCCGCCACTTTCCCTCGCCGTCCACGGCAGCACCATTTCAGTACTCCGCCGCTAATTACACCTACCCTTTTTGCCTCTCTCCGACAACGGTCCCGTACCTACCGCTGATCTTCAGGATGGTGGCGAGATCCAATGGAATGCAACATTTTCGCCATGATAGCTCACTGTTAAGTCAAAGCAATTTGATCTTAGAAGAGATGAGCAGAACCACTCCTTATAGCCTGGAGGAGAAGAAGGTGAGGATTGAGAGATATAGGATTAACAGAAACCAGAGGAAATTCGGGAAAAAAGTTAAGTATAGTTGCAGGAAGACATTGGCAGATAACAGGGCACGTATCGGAGGGCGATTTGCAAAGAATGGCGAAATTGCTCCAGTTGAGTGGAGTCAGATGGGTGTAATCAGAGAGGAAGAGAACTGGCCCACTTTCTTTGATTCCTTAGTTCCACCAAATCAGATGTGTTCTATTAATCAAATATTTATTGAATGCTTAAATCAGCATGCATGGCTAGAAAATTAA 549 0.4536 MYTHSRRTKSLRHFPSPSTAAPFQYSAANYTYPFCLSPTTVPYLPLIFRMVARSNGMQHFRHDSSLLSQSNLILEEMSRTTPYSLEEKKVRIERYRINRNQRKFGKKVKYSCRKTLADNRARIGGRFAKNGEIAPVEWSQMGVIREEENWPTFFDSLVPPNQMCSINQIFIECLNQHAWLEN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02437 182 Pfam CCT motif 90 130 IPR010402 GO:0005515
Pste1g02437 182 ProSiteProfiles CCT domain profile. 88 130 IPR010402 GO:0005515
Pste1g02437 182 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 62 139 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02437 Pste-Chr1 8774402 8779137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02437 79 129 C2C2-CO-like Transcription Factor Family AT5G24930 47.059 2.88e-08 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste1g02437 CCT 9.6e-14 CL0281