LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste1g02422	ATGCCAAGAAAAGGAATGAGAAGCATTTTCTTCAAACCATCATCAAATCCGCCAACATCCCCTTCCCCACATGCACATCGCAGTTTCTCAGACTCATTAATGGAAGAAAAAATAGAAACCGCAGAGAGGCTAATAACAAAATGGGATGTTTCAAAGGCAAATTACCAATCAGGTATATTCAGCGGCACGAGGGAGGAAGCAAGACGGTACCTGACAGCCGTTAGGGGACTACAATCTGCTATGCAGTACCTGGTGGCAGAGGATTCCACCTCCACCACCCTCGTACGCGCACAGTTTCTCATGCAACTCGCCATGAAGACGCTCCAGAAAGAGTTCCACCAGATTCTATCCGCCAACAGAGAACACCTGGACCCCGAAACCGTCTCCACGCGCTCCTCCATCGACCTTACAAGCAGCGTCTCCGTCTCCGATTACGAAGACGAAATCTCACTCTCCGAGGACGAGTTCCGCGTCTCCGAGACCGAGCGAGTTTCCATGCTCGCCATGGACGATTTGAAAGCCATAGCAGAATGCATGATTTCCACCGGCTACGGCAAAGAGTGCGTCAAGGTTTACATCCTCATCAGAAAATCCATCGTCGACGAAGCTCTCTACCATCTCGGATTCGATAAATTCACCTTCTCTCAGGTTCAGAAACTCGACTGGCAGGTCCTCGAGCTCAAGATCAAGACCTGGTTAAAGGCGGTTAAAGTCGCCGTCCCAACTCTCTTCCACGGGGAGAGGATCCTCTGTGATCACGTTTTCGGCGCCGATTCGGGAAAAAGAATAGCGGAATCATGTTTCGCCGAAATTACTAAAGACGGCGCCGTTTCGCTCTTTGGATTCCCAGAAATGGTGGCCAAGTGCAAGAAATCGCCGGAGAAAATGTTCAGGACTTTGGATTTGTACGAAGCCATATCCGACCACTGGCCTCGGATCGAATCCATATTCTCTTCTGAATCCACGTCTAACATTCGATTACAGGCCGTTACGTCCATGGTCAAACTTGGAGAGGCCGTTAGAATGATGCTAATGGACTTCGAATCCGCAATTCAGAAGGAATCCTCCAAGAAACCCGTGCCCGGCGGTGGAATCCATCCTCTCACGCGCTACGTCATGAACTACCTCACCTTCCTCGCCGATTACAGCGCCGTGCTCGTCGATATAATCGCAGATTTGCCGCAGACTCCGTTGCCGGAGTCTTACTACCGCAGCCCCATGCGCCAGCAAAACCCACCGGCATCCGAATTATCGGAGCGAATCGCGTGGCTTATACTGGTGCTGCTCTGCAAACTCGACGGCAAAGCGGAACTGTACAAGGACGTGGCGCTTTCTTACCTGTTCCTCGCGAATAACATGCAATACGTCGTCGTAAAGGTTCGGAGATCCAACCTAGGATTCCTTCTCGGCGAGGAATGGCTAGCGAAGCACGAAGAGAAGGTTAGAGAATACGCCTCCAAATATGAGAGAGTCGGGTGGAGCGCGGTGTTGTCTTCCCTACCGGGAAATCTGGCGGCGGAGTTATCGGCGGAACAGGCCAGGGCCTGCTTCACGAAGTTCGATGCAGCGTTTCATAAAGCATGTAGAAAACAGTCTTCGTGGGTGGTATCCGACCCGAAATTTCGAGATGAAATCAGAGGGTCGATAGGTTCGAAGCTGGAGGAGAAGTACAGCGAATTCTACGAGAAATATCGGGTCGGGTCCAAATCCATTAGGGATTTTTTGCCGGGTGATATTGGGAAATACTACCTGTCTAACATTTTGTCTGGGGACTCAGGTACTGTCTCCTCACATTCTTGGTCAACCACGTCATCTTCCCATAGCTCTAATCGAATGTGA	1839	0.5068	MPRKGMRSIFFKPSSNPPTSPSPHAHRSFSDSLMEEKIETAERLITKWDVSKANYQSGIFSGTREEARRYLTAVRGLQSAMQYLVAEDSTSTTLVRAQFLMQLAMKTLQKEFHQILSANREHLDPETVSTRSSIDLTSSVSVSDYEDEISLSEDEFRVSETERVSMLAMDDLKAIAECMISTGYGKECVKVYILIRKSIVDEALYHLGFDKFTFSQVQKLDWQVLELKIKTWLKAVKVAVPTLFHGERILCDHVFGADSGKRIAESCFAEITKDGAVSLFGFPEMVAKCKKSPEKMFRTLDLYEAISDHWPRIESIFSSESTSNIRLQAVTSMVKLGEAVRMMLMDFESAIQKESSKKPVPGGGIHPLTRYVMNYLTFLADYSAVLVDIIADLPQTPLPESYYRSPMRQQNPPASELSERIAWLILVLLCKLDGKAELYKDVALSYLFLANNMQYVVVKVRRSNLGFLLGEEWLAKHEEKVREYASKYERVGWSAVLSSLPGNLAAELSAEQARACFTKFDAAFHKACRKQSSWVVSDPKFRDEIRGSIGSKLEEKYSEFYEKYRVGSKSIRDFLPGDIGKYYLSNILSGDSGTVSSHSWSTTSSSHSSNRM	612

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste1g02422	612	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	28	576	IPR004140	GO:0000145\|GO:0006887
	Pste1g02422	612	SUPERFAMILY	Cullin repeat-like	55	567	IPR016159	-
	Pste1g02422	612	Gene3D	Exocyst complex component Exo70	43	582	-	-
	Pste1g02422	612	MobiDBLite	consensus disorder prediction	1	28	-	-
	Pste1g02422	612	MobiDBLite	consensus disorder prediction	592	612	-	-
	Pste1g02422	612	Pfam	Exo70 exocyst complex subunit	231	567	IPR046364	GO:0000145\|GO:0005546\|GO:0006887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste1g02422	Pste-Chr1	8586275	8588113	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste1g02422	14	590	EXO70 exocyst subunit family	AT5G59730	50.083	0.0	546