Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02400 ATGGCTCCATCTAAAGCTAGTTCTAAGAAGAGTGATCCAAAAGCACAGGCCTTGAAGACTGCTAAGGCAATGAAGTCTAGTGCTATCTTTAAGAAGAAGGCGAAGAAGATACGAACTTCCGTGACTTTCCAAAGGCCGAAGACATTGAAGAAGGATAGGAATCCCAAAAGATTGAGGATAACAACACTTTGGTTTTCATTGTTGACTTGCGTGCCGAAAAAGAAAAAGATCAAGGATGTCGTCAAGAAAATGTATGACATCCAGGCCAAGAAAGTTAACACCTTGATCAGGCCTGATGGGACCAAGAAAGCCTATGTCAGGTTGACCCCTGATTACGACGCATTGGATGTGACAAAGAAGATTGGGATCATCTAAGGTAGTAGTACCTATGTTCTATTAAATGTTAGGCAGTTCTACTGTGATTCTTGTGGGAAACATTTTAAAAAATGATAGGTTTTATATATTGTGCTTTGATATTTTGTATCTTTTGGCTCAATTGACACTAAGTAGATCTTGTGTTTCAATTTTGATTAGATAGTTGCTTAAGCTTTAAATTGATGTAAAAAATTTTCTAATCAGGTAATTAGCCTATAGTACATGAGACTGATGAGTGTCTCGAAGTTGATTGCCTAAATCGTGTGTGGTTAAAGAAATTGTATAACGCATGTATCCTGGTA 677 0.3737 MAPSKASSKKSDPKAQALKTAKAMKSSAIFKKKAKKIRTSVTFQRPKTLKKDRNPKRLRITTLWFSLLTCVPKKKKIKDVVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVTKKIGII 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02400 124 ProSitePatterns Ribosomal protein L23 signature. 102 117 IPR001014 GO:0019843
Pste1g02400 124 Gene3D - 70 124 IPR012677 -
Pste1g02400 124 PANTHER 60S RIBOSOMAL PROTEIN L23A 73 124 IPR013025 GO:0003735|GO:0005840|GO:0006412
Pste1g02400 124 Pfam Ribosomal protein L23, N-terminal domain 14 59 IPR005633 -
Pste1g02400 124 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 73 116 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02400 Pste-Chr1 8461580 8463251 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02400 26 124 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 53.906 1.82e-25 92.4