Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02398 ATGGCTCCATCTAAAGCTAGTTCTAAGAAGAGTGATCCAAAAGCACAGGCCTTGAAGACTGCTAAGGCAATGAAGTCTAGTGCTATCTTTAAGAAGAAAGCAAAGAAGATACGAACTTTCGTGACTTTCCACAGGCCGAAGACATTGAAGAAGGATAGGAATCCTAAAAGATTGAGGATAACAACACTTTGGTTTTCATTGTTGACTTGCGTGCCAAAAAAGAAGAAGATCAAGGATGCCGTCAAGAAAATGTATGACATCCAGGCCAAGAAAGTTAACACCTTGATCAGGCCTGATGGCACGAAGAAAGTCTATGTCAGGTTAATCCCTGTGATTATGACACACTAA 348 0.408 MAPSKASSKKSDPKAQALKTAKAMKSSAIFKKKAKKIRTFVTFHRPKTLKKDRNPKRLRITTLWFSLLTCVPKKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKVYVRLIPVIMTH 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02398 115 Gene3D - 70 113 IPR012677 -
Pste1g02398 115 Pfam Ribosomal protein L23, N-terminal domain 14 59 IPR005633 -
Pste1g02398 115 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 73 109 IPR012678 GO:0003735|GO:0005840|GO:0006412
Pste1g02398 115 PANTHER 60S RIBOSOMAL PROTEIN L23A 73 110 IPR013025 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02398 Pste-Chr1 8452547 8453885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02398 26 110 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 50.000 2.76e-15 65.9