Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02394 AATCGAAGAAACAAATCTGAAAAGAAAAAAACCGGAAATATGGGCTTGAAAAGTATATGTTGTATCATTCAAGTGACTCTCACAGTAGTTTTTATTACAAGCCGATTTGTCTTATCTGATAATGTGCCAATTCCTGCTGACAAGGGAAAAGTAGAAGAATGGTTTAAAACTAACGTTGGTCCTTTAGATAAAAGAAAAAGCAGTTTGGACCCTGAATTAGTGACGGCTGAAGCCTCTCCTAAGGTTATAAAAGTAATGAAAGATGGTAGTGGAGAATTTAAAACCATCACGGATGCCCTTAAAAGCATACCTTCTGGGAACACCAAGCGTACAATTTTGTACATTGGAGCTGGAACTTATCAAGAGAAAATCAAAGTCGATAAGTCAAAGCCTTTCGTCACCCTTTATGGAGCACCAGGAAATATGCCAAACTTGACCTTTGGGGCACTGCAGCACAATATGGCACTGTCGATAAACACTGCAACGAGACCAGATGGGAAAAAAACAGGAGCCCAAGCAGTAACATTACGAATTTCTGGTGACAAAGCAACATTTTATAATTGTAAAATGTATGGATTCCAAGACACATTGTGTGATGATAAGCATAGACATTTTTTCAAAGATTGCTTAATTCAAGGCACCGTGGATTATATTTTCGAAGTGGAAAAAACTGAGCTAAGAACAATTGCCGAATCCTGGACTACATTTATAACCGCACAAGCAAGAAAAGGTGATCATGAGAACGATGGCTACTCATTTGTACATTGTGACGTTACTGGAAGTGCAAAGGGCACTTTCTTGGGCAGAGCATGGTTTTCTCATCCCAGAGTGGTCTTCGCTTATAGCACCATGAGTGACATGGTGGATAAAAAAGGATGGAGTAATAACAATCACCCTGAACATGACAATAATCTGCTTTTTGGAGAGTTTAAAAATCGGGACCAGTGCAGATCCCAAGGCGTGCTCCTATTACTAGGCACTTCATCAAGAAAGCACCAAACCTTTCATAAGCCTAGAGATGATTGAGGGCTCCAAATGGTTACTTCCTCCTCCAACTGTATAACTAGCTTTCATGTCTTGTAATATATTGTGTTAAACATGTAATATTTTGTTTCAAATTCAATTTCAAATTAAAGTGAGGTCGGTGTAAACTTAGATTAGTCGATACATAAGTGTTGTATCTGTTTAGGCGCCCATGCACACTATTGTGATCAATAAGCTTGCACAATTGATCTGGAATCTTGGGATTGTTGTTACTTTAAACTTTTGCTAGGAC 1276 0.3856 NRRNKSEKKKTGNMGLKSICCIIQVTLTVVFITSRFVLSDNVPIPADKGKVEEWFKTNVGPLDKRKSSLDPELVTAEASPKVIKVMKDGSGEFKTITDALKSIPSGNTKRTILYIGAGTYQEKIKVDKSKPFVTLYGAPGNMPNLTFGALQHNMALSINTATRPDGKKTGAQAVTLRISGDKATFYNCKMYGFQDTLCDDKHRHFFKDCLIQGTVDYIFEVEKTELRTIAESWTTFITAQARKGDHENDGYSFVHCDVTGSAKGTFLGRAWFSHPRVVFAYSTMSDMVDKKGWSNNNHPEHDNNLLFGEFKNRDQCRSQGVLLLLGTSSRKHQTFHKPRDD 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02394 341 Pfam Pectinesterase 83 315 IPR000070 GO:0030599|GO:0042545
Pste1g02394 341 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 75 317 - -
Pste1g02394 341 SUPERFAMILY Pectin lyase-like 77 313 IPR011050 -
Pste1g02394 341 Gene3D - 40 157 IPR012334 -
Pste1g02394 341 Gene3D - 158 319 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02394 Pste-Chr1 8411632 8413363 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02394 23 311 Carbohydrate Esterase AT1G69940 47.604 3.33e-101 300