Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02385 AATCGAAGAAACAAATCTGAAAAGAAAAAAACCGGAAATATGGGCTTGAAAAGTATATGTTGTATCATTCAAGTGACTCTCACAGTAGTTTTTATTACAAGCCGATTTGTCTTATCTGATAATGTGCCAATTCCTGCTGACAAGGGAAAAGTAGAAGAATGGTTTAAAACTAACAAAAGCAGTTTGGACCCTGAATTAGTGACGGCTGAAGCCTCTCCTAAGGTTATAAAAGTAATGAAAGATGGTAGTGGAGAATTTAAAACCATCACGGATGCCCTTAAAAGCATACCTTCTGGGAACACCAAGCGTACAATTTTGTACATTGGAGCTGGAACTTATCAAGAGAAAATCAAAGTCGATAAGTCAAAGCCTTTCGTCACCCTTTATGGAGCACCAGGAAATATGCCAAACTTGACCTTTGGGGCACTGCAGCACAATATGGCACTGTCGATAAACACTGCAGCGAGACCAGATGGGAAAAAAACAGGAGCCCAAGCAGTAGCATTACGAATTTCTGGTGACAAAGCAGCATTTTATAATTGTAAAATGTATGGATTCCAAGACACATTGTGTGATGATAGGCATAGACATTTTTTCAAAGATTGCTTAATTCAAGGCACCGTGGATTATATTTTCGGAAGTGGGAAGTCACTATATTTGAAAACTGAGCTAAGAACAATTGCTGAATCCTGGACTACATTTATAACCGCACAAGCAAGAAAAGGTGATCATGAGAACGATGGCTACTCATTTGTACATTGTGACGTTACTGGAAGTGCAAAGGGCACTTTCTTGGGCAGAGCATGGTTTTCTCATCCCAGAGTGGTCTTCGCTTATAGCACCATGAGTGACATGGTGGATAAAAAAGGCTGGAAACTGCTTTTTGAGAGTTTAAAAATCGGGGACCAGTGCAGATCCCCAAGGCGTGCTCTTATTACTAGGCAACTTCTTCAAGAAACAGTCAAACCTTTCATAAGCCTAGAGATGATTGAGGGCTCCAAATGGTTACTTCCTCCTCCAACTGTATAACTAGCTTTCATGTCTTGTAATATATTGTGTTAAACATGTAATATTTTGTTTCAAATTTAGTTTCAAATTAAAGTGAGGTCGGTGGAAACTTAGATTAGTCGATACACAAGTGGTGTATCTGTTTAGGCGTCCATGCACACTATCGTGATCAATAAGCTTGGAACAATTGACTGGAATCTTGGGATTGTTGTTACTTTAAACTTTTGCTAGGACATATTCACTGAATAGGTCTCTATATATACATGCCAAAGGGAAATGT 1288 0.3898 NRRNKSEKKKTGNMGLKSICCIIQVTLTVVFITSRFVLSDNVPIPADKGKVEEWFKTNKSSLDPELVTAEASPKVIKVMKDGSGEFKTITDALKSIPSGNTKRTILYIGAGTYQEKIKVDKSKPFVTLYGAPGNMPNLTFGALQHNMALSINTAARPDGKKTGAQAVALRISGDKAAFYNCKMYGFQDTLCDDRHRHFFKDCLIQGTVDYIFGSGKSLYLKTELRTIAESWTTFITAQARKGDHENDGYSFVHCDVTGSAKGTFLGRAWFSHPRVVFAYSTMSDMVDKKGWKLLFESLKIGDQCRSPRRALITRQLLQETVKPFISLEMIEGSKWLLPPPTV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02385 342 ProSitePatterns Pectinesterase signature 2. 204 213 IPR033131 -
Pste1g02385 342 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 68 336 - -
Pste1g02385 342 Pfam Pectinesterase 76 131 IPR000070 GO:0030599|GO:0042545
Pste1g02385 342 Pfam Pectinesterase 163 292 IPR000070 GO:0030599|GO:0042545
Pste1g02385 342 SUPERFAMILY Pectin lyase-like 70 336 IPR011050 -
Pste1g02385 342 Gene3D - 28 303 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02385 Pste-Chr1 8372516 8374293 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02385 14 342 Carbohydrate Esterase AT1G69940 44.384 3.38e-106 313