Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02382 ATGTTGTATCATTCAAGTGACTCTCACAGTAGTTTTATTACAAGCCGATTTGTCTTATCTGATAATGTGCCAATTCCTGCTGACAAGGGAAAAGTAGAAGAATGGTTTAAAACTAACGTTGGTCCTTTAGATAAAAGAAAAAGCAGTTTGGACCCTGAATTAGTGACGGCTGAAGCCTCTCCTAAGGTTATAAAAGTAATGAAAGATGGTAGTGGAGAATTTAAAACCATCACGGATGCCCTTAAAAGCATACCTTCTGGGAACACCAAGCGTACAATTTTGTACATTGGAGCTGGAACTTATCAAGAGAAAATCAAAGTCGATAAGTCAAAGCCTTTCGTCACCCTTTATGGAGCACCAGGAAATATGCCAAACTTGACCTTTGGGGCACTGCAGCACAATATGGCACTGTCGATAAACACTGCAGCGAGACCAGATGGGAAAAAAACAGGAGCCCAAGCAGTAGCATTACGAATTTCTGGTGACAAAGCAGCATTTTATAATTGTAAAATGTATGGATTCCAAGACACATTGTGTGATGATAGGCATAGACATTTTTTCAAAGATTGCTTAATTCAAGGCACCGTGGATTATATTTTCGGAAGTGGGAAGTCACTATATTTGAAAACTGAGCTAAGAACAATTGCTGAATCCTGGACTACATTTATAACCGCACAAGCAAGAAAAGGTGATCATGAGAACGATGGCTACTCATTTGTACATTGTGACGTTACTGGAAGTGCAAAGGGCACTTTCTTGGGCAGAGCATGGTTTTCTCATCCCAGAGTGGTCTTCGCTTATAGCACCATGAGTGACATGGTGGATAAAAAAGGCTGGAGTAATAACAATCACCCTGAACATGACAAAACTGCATTTTTGGAGAGTTTAAAAATCAGGGACCAGGTGCAGATCCCCAAGGGCGTGCTCCTATTACTAGGCAACTTACTGAAGAAACAGTCAAACCTTTCATAAGCCTAGAGATGATTGAGGGCTCCAAATGGTTACTTCCTCCTCCAACTGTATAACTAGCTTTCATGTCTTGTAATATATTGTGTTAAATATGTAATATTTTGTTTCAAATTTAGTTTCAAATTAAAGTGAGGTCGGTGGAAACTTAGATTAGTCGATACACAAATGGTGTATCTGTTTAGCGTCCATGCACACTATCGTGATCAATAAGCTTGGAATAATTGACTGGAATCTTGGGATTGTTGTTACTTTAAACTTTTGCTAGGACATATTCACTGAATAGGTCTCTATATATATATGCCAAAGGGAAATGT 1283 0.3897 MLYHSSDSHSSFITSRFVLSDNVPIPADKGKVEEWFKTNVGPLDKRKSSLDPELVTAEASPKVIKVMKDGSGEFKTITDALKSIPSGNTKRTILYIGAGTYQEKIKVDKSKPFVTLYGAPGNMPNLTFGALQHNMALSINTAARPDGKKTGAQAVALRISGDKAAFYNCKMYGFQDTLCDDRHRHFFKDCLIQGTVDYIFGSGKSLYLKTELRTIAESWTTFITAQARKGDHENDGYSFVHCDVTGSAKGTFLGRAWFSHPRVVFAYSTMSDMVDKKGWSNNNHPEHDKTAFLESLKIRDQVQIPKGVLLLLGNLLKKQSNLS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02382 323 SUPERFAMILY Pectin lyase-like 58 292 IPR011050 -
Pste1g02382 323 ProSitePatterns Pectinesterase signature 2. 192 201 IPR033131 -
Pste1g02382 323 Gene3D - 138 302 IPR012334 -
Pste1g02382 323 Gene3D - 22 137 IPR012334 -
Pste1g02382 323 Pfam Pectinesterase 64 291 IPR000070 GO:0030599|GO:0042545
Pste1g02382 323 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 57 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02382 Pste-Chr1 8358993 8360720 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02382 12 297 Carbohydrate Esterase AT1G69940 50.492 1.46e-107 316