Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02374 AATCGAAGAAACAAATCTGAAAAGAAAAAAACCGGAAATATGGGCTTGAAAAGTATATGTTGTATCATTCAAGTGACTCTCACAGTAGTTTTTATTACAAGCCGATTTGTCTTATCTGATAATGTGCCAATTCCTGCTGACAAGGGAAAAGTAGAAGAATGGTTTAAAACTAACAAAAGCAGTTTGGACCCTGAATTAGTGACGGCTGAAGCCTCTCCTAAGGTTATAAAAGTAATGAAAGATGGTAGTGGAGAATTTAAAACCATCACGGATGCCCTTAAAAGCATACCTTCTGGGAACACCAAGCGTACAATTTTGTACATTGGAGCTGGAACTTATCAAGAGAAAATCAAAGTCGATAAGTCAAAGCCTTTCGTCACCCTTTATGGAGCACCAGGAAATATGCCAAACTTGACCTTTGGGGCACTGCAGCACAATATGGCACTGTCGATAAACACTGCAGCGAGACCAGATGGGAAAAAAACAGGAGCCCAAGCAGTAGCATTACGAATTTCTGGTGACAAAGCAGCATTTTATAATTGTAAAATGTATGGATTCCAAGACACATTGTGTGATGATAGGCATAGACATTTTTTCAAAGATTGCTTAATTCAAGGCACCGTGGATTATATTTTCGGAAGTGGGAAGTCACTATATTTGAAAACTGAGCTAAGAACAATTGCCGAATCCTGGACTACATTTATAACCGCACAAGCAAGAAAAGGTGATCATGAGAACGATGGCTACTCATTTGTACATTGTGACGTTACTGGAAGTGCAAAGGGCACTTTCTTGGGCAGAGCATGGTTTTCTCATCCCAGAGTGGTCTTCGCTTATAGCACCATGAGTGACATGGTGGATAAAAAAGGATGGAGTAATAACAATCACCCTGAACATGACAATAATCTGCTTTTTGGAGAGTTTAAAAATCGGGGACCAGTGCAGATCCCAAGGCGTGCTCCTATTACTAGGCAGCTTCATCAAGAAATAGTCAAACCTTTCATAAGCCTAGAGATGATTGAGGGCTCCAAATGGTTACTTCCTCCTCCAACTGTATAACTAGCTTTCATGTCTTGTAATATATTGTGTTAAACATGTAATATTTTGTTTCAAATTCAATTTCAAATTAAAGTGAGGTCGGTGTAAACTTAGATTAGTCGATACATAAGTGTTGTATCTGTTTAGGCGTCCATGCACACTATTGTGATCAATAAGCTTGCACAATTGACTGGAATCTTGGGATTGTTGTTACTTTAAACTTTTGCTAGGAC 1271 0.3887 NRRNKSEKKKTGNMGLKSICCIIQVTLTVVFITSRFVLSDNVPIPADKGKVEEWFKTNKSSLDPELVTAEASPKVIKVMKDGSGEFKTITDALKSIPSGNTKRTILYIGAGTYQEKIKVDKSKPFVTLYGAPGNMPNLTFGALQHNMALSINTAARPDGKKTGAQAVALRISGDKAAFYNCKMYGFQDTLCDDRHRHFFKDCLIQGTVDYIFGSGKSLYLKTELRTIAESWTTFITAQARKGDHENDGYSFVHCDVTGSAKGTFLGRAWFSHPRVVFAYSTMSDMVDKKGWSNNNHPEHDNNLLFGEFKNRGPVQIPRRAPITRQLHQEIVKPFISLEMIEGSKWLLPPPTV 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02374 352 ProSitePatterns Pectinesterase signature 2. 204 213 IPR033131 -
Pste1g02374 352 SUPERFAMILY Pectin lyase-like 70 347 IPR011050 -
Pste1g02374 352 Gene3D - 74 349 IPR012334 -
Pste1g02374 352 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 68 346 - -
Pste1g02374 352 Pfam Pectinesterase 76 314 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02374 Pste-Chr1 8308760 8310491 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02374 23 352 Carbohydrate Esterase AT1G69940 47.191 1.28e-116 340