Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02370 AATCGAAGAAACAAATCTGAAAAGAAAAAACCGGAAATATGGGCTTGAAAAGTATATGTTGTATCATTCAAGTGACTCTCACAGTAGTTTTATTACAAGCCGATTTGTCTTATCTGATAATGTGCCAATTCCTGCTGACAAGGGAAAAGTAGAAGAATGGTTTAAAACTAACGTTGGTCCTTTAGATAAAAGAAAAAGCAGTTTGGACCCTGAATTAGTGACGGCTGAAGCCTCTCCTAAGGTTATAAAAGTAATGAAAGATGGTAGTGGAGAATTTAAAACCATCACGGATGCCCTTAAAAGCATACCTTCTGGGAACACCAAGCGTACAATTTTGTACATTGGAGCTGGAACTTATCAAGAGAAAATCAAAGTCGATAAGTCAAAGCCTTTCGTCACCCTTTATGGAGCACCAGGAAATATGCCAAACTTGACCTTTGGGGCACTGCAGCACAATATGGCACTGTCGATACTAACATCATCATCGCGAACACTGCAGCGAGACCAGATGGGAAAAAAAACAGGAGCCCAAGCAGTAGCATTACGAATTTCTGGTGACAAAGCAGCATTTTATAATTGTAAAATGTATGGATTCCAAGACACATTGTGTGATGATAGGCATAGACATTTTTTCAAAGATTGCTTAATTCAAGGCACCGTGGATTATATTTTCGGAAGTGGGGAAAAAACTGAGCTAAGAACAATTGCTGAATCCTGGACTACATTTATAACCGCACAAGCAAGAAAAGGTGATCATGAGAACGATGGCTACTCATTTGTACATTGTGACGTTACTGGAAGTGCAAAGGGCACTTTCTTGGGCAGAGCATGGTTTTCTCATCCCAGAGTGGTCTTCGCTTATAGCACCATGAGTGACATGGTGGATAAAAAAGGCTGGAGTAATAACAATCACCCTGAACATGACAAAACTGCGTTTTTTGGAGAGTTTAAAAATCAGGGACCAGGTGCAGATCCCCAAGGGCGTGCTCCTATTACTAGGCAGCTTCCTGAAGAAACAGTCAAACCTTTCATAAGCCTAGAGATGATTGAGGGCTCCAAATGGTTACTTCCTCCTCCAACTGTATAACTAGCTTTCATGTCTTGTAATATATTGTGTTAAACATGTAATATTTTGTTTCAAATTTAGTTTCAAATTAAAGTGAGGTCGGTGGAAACTTAGATTAGTCGATACACAAATGGTGTATCTGTTTAGGCGTCCATGCACACTATCGTGATCAATAAGCTTGGAACAATTGACTGGAATCTTGGGATTGTTGTTACTTTAAACTTTTGCTAGGACATATTCACTGAATAGGTCTCTATATATACATGCCAAAGGGAAATGT 1346 0.393 MLYHSSDSHSSFITSRFVLSDNVPIPADKGKVEEWFKTNVGPLDKRKSSLDPELVTAEASPKVIKVMKDGSGEFKTITDALKSIPSGNTKRTILYIGAGTYQEKIKVDKSKPFVTLYGAPGNMPNLTFGALQHNMALSILTSSSRTLQRDQMGKKTGAQAVALRISGDKAAFYNCKMYGFQDTLCDDRHRHFFKDCLIQGTVDYIFGSGEKTELRTIAESWTTFITAQARKGDHENDGYSFVHCDVTGSAKGTFLGRAWFSHPRVVFAYSTMSDMVDKKGWSNNNHPEHDKTAFFGEFKNQGPGADPQGRAPITRQLPEETVKPFISLEMIEGSKWLLPPPTV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02370 343 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 57 337 - -
Pste1g02370 343 SUPERFAMILY Pectin lyase-like 58 338 IPR011050 -
Pste1g02370 343 ProSitePatterns Pectinesterase signature 2. 198 207 IPR033131 -
Pste1g02370 343 Gene3D - 62 340 IPR012334 -
Pste1g02370 343 Pfam Pectinesterase 64 312 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02370 Pste-Chr1 8295526 8297311 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02370 12 343 Carbohydrate Esterase AT1G69940 47.578 3.97e-116 338