Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02369 CGAAGACCCAATCAGAGAGCGCATATTTAATCTATCGTGTCGTATAACCAACCTTCTCCTTTCTCTCACTCCCATCATCAAACCCTAAACTTTCCCTTTCCCTCTCATCAGATCCATTTGTAGTTTCGCCAAACCCTAATTCTGAATCTGCGAACATGTCTGCAGCCCTCGATATGACGCTCGATGACATAATCAAGAACAACAAAAAATCTGGATCCGGAAATTCCCGTGGCCGGACCCGACCCTCCGGATCCGGACCTGGACCTTCTCGCCGCTTCCCCAACCGCGCCGCCAACCGCGCCGCTCCTTATGCCACCGCTAAGGCACCGGAGGCGACGTGGCAGCACGATTTGTATGCAGATCAGCATGTGGCTACGGCCGGGTACCCTGCTCAAGGTGCTCGTGCATCCTCCATAGAAACTGGGACTAAGCTTTACATTTCCAACTTGGATTATGGTGTTTCCAATGACGATATTAAGGAATTGTTTTCTGAAGTTGGTGACCTGAAACGGCATGGGGTTCATTATGACAGGAGTGGCAGATCGAAGGGTACGGCAGAAGTAGTATTTTCACGACGAGCTGATGCTGTAGCTGCTGTAAAGAGATACAACAATGTTCAATTAGATGGGAAACCAATGAAGATAGAGATTGTGGGAACAAACATTTCTACCCCTGGTGTAGCTCCTGCCGCAAATGTAGCTATTGGAAATTTGAATGGAGTTCCTCGAAGTGGACAAGTAAGAGGTGGGGCGTCAAGAAGGCCAGGAGGAAGAGGGCAAGGTATTCGGAGGGATCGAGGACGGGGAAGAGGTCGTGGTGGAGGGGGCCGTGGCGAAAAGTTATCTGCAGATGATCTTGATGCTGATTTGGAGAAGTATCATGCAGAGGCAATGCAATTGAACTGA 905 0.4961 MSAALDMTLDDIIKNNKKSGSGNSRGRTRPSGSGPGPSRRFPNRAANRAAPYATAKAPEATWQHDLYADQHVATAGYPAQGARASSIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVAPAANVAIGNLNGVPRSGQVRGGASRRPGGRGQGIRRDRGRGRGRGGGGRGEKLSADDLDADLEKYHAEAMQLN 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02369 249 MobiDBLite consensus disorder prediction 14 31 - -
Pste1g02369 249 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 91 168 IPR000504 GO:0003723
Pste1g02369 249 SMART FoP_duplication_2 179 249 IPR025715 -
Pste1g02369 249 CDD RRM_THOC4 91 165 - -
Pste1g02369 249 SMART rrm1_1 92 164 IPR000504 GO:0003723
Pste1g02369 249 MobiDBLite consensus disorder prediction 206 233 - -
Pste1g02369 249 Pfam C-terminal duplication domain of Friend of PRMT1 194 243 IPR025715 -
Pste1g02369 249 MobiDBLite consensus disorder prediction 188 233 - -
Pste1g02369 249 MobiDBLite consensus disorder prediction 1 56 - -
Pste1g02369 249 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 5 247 - -
Pste1g02369 249 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 93 161 IPR000504 GO:0003723
Pste1g02369 249 SUPERFAMILY RNA-binding domain, RBD 81 167 IPR035979 GO:0003676
Pste1g02369 249 Gene3D - 78 230 IPR012677 -
Pste1g02369 249 FunFam THO complex subunit 4 84 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02369 Pste-Chr1 8286929 8291443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02369 90 165 Eukaryotic Initiation Factors Gene Family AT2G23350 35.526 4.41e-09 54.7