Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02361 CATAGTCCTGAGTCCTGACAAGTTCAGAAACAGTAGACGTGGATAGAGAGAGACTACACTGTTCAGTGTTGCAGTTATCAACCTCATCTACTGCATGTTCCTTGCCTTAAGGTTTCAGCTTTACTAGTAAATCCCTCTATACATATTCACTACTTGTTTTGATTTTTGGGTGTTTGCTTGTTTCAAAGTTTGGTATGATGCCACCATTTTGTTTCGGTGTCTTCATCATGCTACTCAACTTTCCGTGAGTTTGAAGGATCCCAAAGTTGTTTCTTTTCTATTCAATTATTGGTCTTTTGGTATGGAATTAAGTAATTTAAAAAATAGGCTTTTTAATTTACAGTTTGGTGGGGGAATTTCTAAGGTCCGGACTCCGGATCTTCTTTCTTCTATAAATTGTCTGATCATTAGATCGTTTGGATCAGATCTGTGGTTTGGGCTTTAAGATTTGCCTATCTTTGTCCATTGATCTGAGTTTCAGAGGTTACTTTGACAATGGCAACGAATACTTCTAATGGAACAACAAAGCAACCTCCCATGCCATCTCCCTTGCGTTTTTCCAAGTTCTTTCAGTCCAATATGAGAATTCTGGTTACTGGAGGAGCTGGATTTATTGGCTCTCACCTGGTTGACAAATTGATGGAAAATGAGAAAAATGAGGTCATTGTTGCTGACAACTTCTTCACTGGATCTAAAGACAACCTTAAAAAATGGATTGGACATCCAAGATTCGAGCTAATTCGCCATGATGTCACGGAGCAATTGTTGGTTGAGGTTGATCAAATCTATCATCTTGCTTGCCCTGCTTCTCCAATTTTTTACAAGTACAATCCTGTAAAGACAATAAAGACAAATGTTATTGGAACACTAAACATGCTTGGGCTTGCTAAGCGTGTTGGAGCAAGGATTTTGCTTACATCTACATCAGAAGTATACGGGGACCCTCTTGTTCATCCACAACCAGAAAGCTATTGGGGCAATGTTAACCCTATTGGAGTTCGAAGTTGTTATGATGAGGGCAAGCGTGTTGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGCATTGCAAGAATCTTTAACACATATGGACCACGCATGAATATTGATGATGGGCGTGTTGTCAGCAACTTCATCGCCCAAGCACTTCGTGATGAACCCTTAACAGTCCAACTTCCAGGAACTCAGACTCGCAGTTTCTGCTATGTCTCTGACATGGTTGATGGGCTAATACGTCTAATGGAAGGGGAAAACACTGGTCCAATCAACATTGGGAACCCAGGTGAATTTACAATGATTGAACTTGCTGAGAATGTGAAAGAGCTTATTAATCCAGCTGTGGAAATAAAGATGGTTGAGAATACTCCAGATGATCCTCGTCAGAGAAAACCAGACATTACAAAAGCAAAGGAATTACTGGGATGGGAACCAAAGGTCAAGTTGCGTGATGGCCTTCCTCTTATGGAAAAGGATTTCCGTGAGAGGCTTGGGGGTTGGGCTTTGGATTTGAGGAGCAATTATACTTCCAAGCCTCTTGCAATGGCAGCGAATTCTTCTGATGGAAATCACATTAAATCACCAAAACAACCTCCCTTGCCATCTCCCTTGCGTTTCTCCAAATTCTATCAGTCTAACATGAGAATCTTGATCACGGGAGGAGCTGGATTCATTGGTTCTCACCTAGTTGATAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGATAACTACTTCACTGGATCGAAGGACAACCTCAAAAAATGGATCGGTCATCCAAGATTTGAGCTTATCCGTCATGCTGGCTGTATACTATTATCAGGAAACATGAACAGCGATACCTTAGTGTATATGCTATATTGTATATATTATGTCTACAATGTCTTCAAATCTGTGAAAATTAATTATACTGATACACACTATTATGATCCCTTTTTAGATGTCACTGAACCTTTGATGATTGAGGTTGATCAGATCTACCATCTTGCATGCCCCGCATCTCCTATTTTCTACAAATATAATCCTGTGAAGACAATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGAGCAAGGATTTTACTTACATCAACATCGGAGGTATATGGGGATCCTCTAGAGCATCCCCAACCTGAAAGCTATTGGGGCAATGTGAACCCGATTGGAGTTCGTAGTTGCTATGATGAGGGGAAACGTGTGGCTGAGACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGTGTTGCAAGAATCTTTAACACGTACGGGGCCCGTATGAATATTGATGATGGACGTGTTGTCAGCAATTTCATTGCTCAAGCGATTCGTGGTGAACCCTTGACTGTCCAGTCTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGATCTGGTTGATGGCCTTATCCGTCTCATGAATGGATCAGATACTGGGCCAATCAACCTTGGAAATCCAGGTGAATTTACAGTGCTTGAACTTGCTGAGACAGTGAAGGAGCTTATTAATCCAAATGTGGAGATAAGGATAGTGGATAACACTCCAGATGATCCGCGACAGAGAAAGCCAGACATAACAAAAGCCAAGGAATTGCTTGGCTGGGAACCAAAGGTTAAGCTTCAAGAGGGACTTCCTCTTATGGAGGAGGATTTCCGTTTGAGGCTTGGAGTTGACAAAATAAATTAACTTAATTTCGATCTTTTAATATTTAGTCAAGCTAGATAAGATAATAAGTGGAATGGAATAGGCTATAAGTTTTTTCTTCATAATTATGATACTGAGTAAGTAGGGATACCTCTGATTTGGCTTCGATAAGTGTCAAAGACCGTGCTCTTGTTTCACAAAAACACTGCAGCAATCACATCTGCAAATTTTGCCGGTGGAGCTATTACTGAGTTAAAAAATAGTCCCTGCTTTATGG 2968 0.405 MATNTSNGTTKQPPMPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVADNFFTGSKDNLKKWIGHPRFELIRHDVTEQLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRDEPLTVQLPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMIELAENVKELINPAVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEKDFRERLGGWALDLRSNYTSKPLAMAANSSDGNHIKSPKQPPLPSPLRFSKFYQSNMRILITGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHAGCILLSGNMNSDTLVYMLYCIYYVYNVFKSVKINYTDTHYYDPFLDVTEPLMIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGARMNIDDGRVVSNFIAQAIRGEPLTVQSPGTQTRSFCYVSDLVDGLIRLMNGSDTGPINLGNPGEFTVLELAETVKELINPNVEIRIVDNTPDDPRQRKPDITKAKELLGWEPKVKLQEGLPLMEEDFRLRLGVDKIN 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02361 745 FunFam UDP-glucuronic acid decarboxylase 6 485 740 - -
Pste1g02361 745 CDD UGD_SDR_e 29 333 - -
Pste1g02361 745 Gene3D - 28 336 - -
Pste1g02361 745 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 381 736 IPR036291 -
Pste1g02361 745 Pfam GDP-mannose 4,6 dehydratase 495 729 IPR016040 -
Pste1g02361 745 Pfam GDP-mannose 4,6 dehydratase 32 326 IPR016040 -
Pste1g02361 745 Pfam GDP-mannose 4,6 dehydratase 389 438 IPR016040 -
Pste1g02361 745 Gene3D - 383 555 - -
Pste1g02361 745 Gene3D - 556 739 - -
Pste1g02361 745 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 15 338 IPR044516 GO:0042732|GO:0048040|GO:0070403
Pste1g02361 745 CDD UGD_SDR_e 386 736 - -
Pste1g02361 745 FunFam UDP-glucuronic acid decarboxylase 6 28 337 - -
Pste1g02361 745 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 23 339 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02361 Pste-Chr1 8262992 8276902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02361 388 728 Miscellaneous Gene Families AT4G00110 22.715 3.47e-16 79.7