Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02360 GAAAAGAAAAAAACTGGAAATATGGGCTTGAAAAGTATATGTTGTATCATTCAAGTGACTCTCACAGTAGTTTTTATTACAAGCCGATTTGTCTTATCTGATAATGTGCCAATTCCTGCTGACAAGGGAAAAGTAGAAGAATGGTTTAAAACTAACGTTGGTCCTTTAGATAAAAGAAAAAGCAGTTTGGACCCTGAATTAGTGACGGCTGAAGCCTCTCCTAAGGTTATAAAAGTAATGAAAGATGGTAGTGGAGAATTTAAAACCATCACGGATGCCCTTAAAAGCATACCTTCTGGGAACACCAAGCGTACAATTTTGTACATTGGAGCTGGAACTTATCAAGAGAAAATCAAAGTCGATAAGTCAAAGCCTTTCGTCACCCTTTATGGAGCACCAGGAAATATGCCAAACTTGACCTTTGGGGGCACTGCAGCACAATATGGCACTGTCGATAGTGCTACATTAATTGTTGAATCTAATTATTTTGTGGCAGCTAACATCATCATCGCGAACACTGCAGCGAGACCAGATGGGAAAAAAACAGGAGCCCAAGCAGTAGCATTACGAATTTCTGGTGACAAAGCAGCATTTTATAATTGTAAAATGTATGGATTCCAAGACACATTGTGTGATGATAGGCATAGACATTTTTTCAAAGATTGCTTAATTCAAGGAACCGTGGATTATATTTTCGGAAGTGGGAAGTCACTATATTTGAAAACTGAGCTAAGAACAATTGCTGAATCCTGGACTACATTTATAACCGCACAAGCAAGAAAAGGTGATCATGAGAACGATGGCTACTCATTTGTACATTGCGACGTTACTGGAAGTGCAAAGGGCACTTTCTTGGGCAGAGCATGGTTTTCTCATCCCAGAGTGGTCTTCGCTTATAGCACCATGAGTGACATGGTGGATAAAAAAGGATGGAGTAATAACAATCACCCTGAACATGACAACACTGCGTTTTTTGGAGAGTTTAAAAATCAGGGACCAGGTGCAGATCCCCAAGGGCGTGCTCCTATTACTAGGCAGCTTACTGAAGAAACAGTCAAACCTTTCATAAGCCTAGAGATGATTGAGGGCTCCAAATGGTTACTTCCTCCTCCAACTGTATAACTAGCTTTCATGTCTTGTAATATATTGTGTTAAACATGTAATATTTTGTTTCAAATTCAATTTCTAATTAAAGTGAGGTCGGTGTAAACTTAGATTAGTCGATACATAAGTGGTGTATCTGTTTAGGCGTCCATGCACACTATTGTGATCAATAAGCTTGGAACAATTGACTGGAATCTTGGGATTGTTGTTACTTTAAACTTTTGCTAGGAC 1335 0.3903 MGLKSICCIIQVTLTVVFITSRFVLSDNVPIPADKGKVEEWFKTNVGPLDKRKSSLDPELVTAEASPKVIKVMKDGSGEFKTITDALKSIPSGNTKRTILYIGAGTYQEKIKVDKSKPFVTLYGAPGNMPNLTFGGTAAQYGTVDSATLIVESNYFVAANIIIANTAARPDGKKTGAQAVALRISGDKAAFYNCKMYGFQDTLCDDRHRHFFKDCLIQGTVDYIFGSGKSLYLKTELRTIAESWTTFITAQARKGDHENDGYSFVHCDVTGSAKGTFLGRAWFSHPRVVFAYSTMSDMVDKKGWSNNNHPEHDNTAFFGEFKNQGPGADPQGRAPITRQLTEETVKPFISLEMIEGSKWLLPPPTV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02360 366 Gene3D - 64 362 IPR012334 -
Pste1g02360 366 SUPERFAMILY Pectin lyase-like 64 361 IPR011050 -
Pste1g02360 366 ProSitePatterns Pectinesterase signature 2. 217 226 IPR033131 -
Pste1g02360 366 FunFam Pectinesterase 65 362 - -
Pste1g02360 366 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 62 360 - -
Pste1g02360 366 Pfam Pectinesterase 70 356 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02360 Pste-Chr1 8249980 8251703 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02360 10 366 Carbohydrate Esterase AT1G69940 54.062 2.15e-145 414