Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02355 GAAAAGAAAAAAACCGGAAATATGGGCTTGAAAAGTATATGTTGTATCATTGAAGTGACTCTCACAGTAGTTTTTATTACAAGCCGATTTGTCTTATCTGATAATGTGCCAATTCCTGCTGACAAGGGAAAAGTAGAAGAATGGTTTAAAACTAACGTTGGTCCTTTAGATAAAAGAAAAGCAGTTTGGACCCTGAATTAGTGACGGCTGAAGCCTCTCCTAAGGTTATAAAAGTAATGAAAGATGGTAGTGGAGAATTTAAAACCATCACGGATGCCCTTAAAAGCATACCTTCTGGGAACACCAAGCGTACAATTTTGTACATTGGAGCTGGAACTTATCAAGAGAAAATCAAAGTCGATAAGTCAAAGCCTTTCGTCACCCTTTATGGAGCACCAGGAAATATGCCAAACTTGACCTTTGGGGGCACTGCAGCACAATATGGCACTGTCGATAGTGCTACATTAATTGTTGAATCTAATTATTTTGTGGCAGCTAACATCATCATCGCGAACACTGCAGCGAGACCAGATGGGAAAAAAACAGGAGCCCAAGCAGTAGCATTACGAATTTCTGGTGACAAAGCAGCATTTTATAATTGTAAAATGTATGGATTCCAAGACACATTGTGTGATGATAGGCATAGACATTTTTTCAAAGATTGCTTAATTCAAGGCACCGTGGATTATATTTTCGGAAGTGGGAAGTCACTATATTTGAAAACTGAGCTAAGAACCATTGCTGAATCCTGGACTACATTTATAACCGCACAAGCAAGAAAAGGTGATCATGAGGACGATGGCTACTCATTTGTACATTGTGACGTTACTGGAAGTGCAAAGGGCACTTTCTTGGGCAGAGCATGGTTTTCTCATCCCAGAGTGGTCTTCGCCTATAGCACCATGAGTGACATGGTGGATAAAAAAGGCTGGAGTAATAACAATCACCCTGAACATGACAAAACTGCATTTTTGGAGAGTTTAAAATCGGGGACCAGTGCAGATCCCAAGGGCGTGCTCTATTACTAGGCAACTTCTTCAAGAAACAGTCAAACCTTTCATAAGCCTAGAGATGATTGAGGGCTCCAAATGGTTACTTCCTCCTCCAACTGTATAACTAGCTTTCATGTCTTGTAATATATTGTGTTAAACATGTAATATTTTGTTTCAAATTCAGTTTCAAATTAAAGTGAGGTCAGTGGAAACTTAGATTAGTCGATACACAAGTGGTGTATCTATTTAGGCGTCCATGCACACTATCGTGATCAATAAGCTTGGAACAATTGACTTGAATCTTGGGATTGTTGTTACTTTAAACTTTTGCTAGGAC 1329 0.3928 MKDGSGEFKTITDALKSIPSGNTKRTILYIGAGTYQEKIKVDKSKPFVTLYGAPGNMPNLTFGGTAAQYGTVDSATLIVESNYFVAANIIIANTAARPDGKKTGAQAVALRISGDKAAFYNCKMYGFQDTLCDDRHRHFFKDCLIQGTVDYIFGSGKSLYLKTELRTIAESWTTFITAQARKGDHEDDGYSFVHCDVTGSAKGTFLGRAWFSHPRVVFAYSTMSDMVDKKGWSNNNHPEHDKTAFLESLKSGTSADPKGVLYY 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02355 263 Pfam Pectinesterase 2 253 IPR000070 GO:0030599|GO:0042545
Pste1g02355 263 ProSitePatterns Pectinesterase signature 2. 145 154 IPR033131 -
Pste1g02355 263 SUPERFAMILY Pectin lyase-like 2 245 IPR011050 -
Pste1g02355 263 Gene3D - 1 257 IPR012334 -
Pste1g02355 263 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02355 Pste-Chr1 8236681 8238397 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02355 6 245 Carbohydrate Esterase AT1G69940 58.333 6.71e-107 312