Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02341 CAATGCCTGATTACTCCACAAGTGGCCAAATGAACGACCAGCTATCCAACCCCACCTCCATATTCGGGCTACGTTTATGGTGCTTGGCGTGTGCGTGGGCGCCGCCATCGTCATCATCCTCTTCCTCATATCCGTCTGGCTCGCCTTCAAGCGTTCCAAAACCAACCCCGTTTCCATTCCCGACGTATCTAAGGAGATCCAGGAAATCAGGTTGGACCACGCCCCAACCCCAACCCCAACCCCAACCCGAACCTGAACTCGAACCCGAACCCCGACCCTTCCCCGAACCTGACCCCATTCCTTCCACCGAAGAAGAAACGTCCACCCCCCTCGCCTACCACCGAATCCAGCTGGAGATTGGGAAGAACCACCGCATCTCCTACCCCTTGGTTCGCTCCACCTCCAATGACCCCGCCAGTGCCGATCAGGTTCCCACCGTCATTCCTGAGGTTTCTCACTTGGGTTGGGGCCACTGGTACACTCTCAGAGAGTTAGAAGATTCCACTAACGCCTTCTCCCCTGACAATGTTATTGGCGAAGGTGGTTATGGAATTGTTTATCACGGTATCCTCAACGACAATACTCATGTTGCCGTTAAGAATTTGCTCAACAATAGGGGCCAAGCTGAGAAGGAATTTAAAGTGGAAGTCGAAGCTATAGGACGAGTTCGCCACAAAAATCTAGTCAGGTTGCTTGGATATTGTGCTGAAGGAGCTCATAGAATGCTTGTTTATGAGTACGTTGACAATGGTAACTTAGAGCAGTGGCTGCATGGGGACGTTGGACCTTGCAGTCCCCTCACATGGGAAATTCGAATGAATATTATTTTGGGAACTGCAAAAGGGTTAACTTATCTTCATGAAGGGTTGGAACCAAAAGTTGTTCACCGGGATATTAAATCGAGCAACATTTTGCTTAGTAAGCAGTGGAATGCAAAGGTATCAGATTTTGGCCTCGCCAAACTCCTTGGCTCTGACAACAGCTATATAACAACCCGTGTCATGGGCACATTTGGATATGTTGCCCCTGAATATGCCAGTACCGGTATGTTAAATGAAAGAAGTGATGTTTATAGTTTTGGAATTCTTATTATGGAAGTGATTACAGGAAGGAATCCAGTTGATTATAGTCGGCCTCCAGAGGAGGTGAATTTAGTAGACTGGCTGAAGAAGATGGTTAGCAACAGAAATCCAGAGGGGGTGTTGGATCCCAAGCTTCCTGAGAAACCAACTTCAAGGGCACTAAAACGAGCCCTTCTTGTAGCCCTACGCTGCACTGATCCTAATGCACAAAAGCGGCCTAAAATGGGGCATGTGATACACATGCTTGAAGCTGAAGATTCGCCATACAAAGAGGATCGCAGGGCTAGAAGGGATGCGGGACATTCACTTAATGATAGAGTAGGGGATGGGTTGAAAGAGGAGGCGACTGTATCAGTTGATGATAGTATGCTTGAAAATGGGATGTGTGCCAATGAGACAAGATCGAACCCTCAAATAGAAAAGCAATAAATTCGTATAGCTGTCTATTTAGTGGGCAAAACCTTGTGGCTCCCTTTACAGCCTGTCATTGCAGAAGGCCAAACAATTTGCATCCTTCGGGCATAAAAATCCTTGATACTTTGCTCTACATTGTTCGAGCCTTCTATATACCTCAGCCTATATTCGCATAATGAACGCGTGGAGATTTCTCCGCATTCTGTCTATCCCGGGCCTTTTTCCGTGGGATGATTGTTGCTAGAGGTTGCTCGTGTAAATTTTAACCATATTGTTCAATTCACCCAATAAAAGATTATTACGTATTGTTGGTTATTATGTTTTGATCTGCTTGAACACTGTTAGATCAAAACATACTGAAAGTGGAGTTGAGAATTGGGATGTATATCGTGTTTAATGTTAGTACCACACACGAGTTTTTTTTTGTTTTTGTCGCTATGCGTGGCTATTATTACCAGTAGTTGGCATTAGAATACATGACAAATTATTTC 1987 0.457 MPDYSTSGQMNDQLSNPTSIFGLRLWCLACAWAPPSSSSSSSYPSGSPSSVPKPTPFPFPTYLRRSRKSGWTTPQPQPQPQPEPELEPEPRPFPEPDPIPSTEEETSTPLAYHRIQLEIGKNHRISYPLVRSTSNDPASADQVPTVIPEVSHLGWGHWYTLRELEDSTNAFSPDNVIGEGGYGIVYHGILNDNTHVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLSKQWNAKVSDFGLAKLLGSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVDYSRPPEEVNLVDWLKKMVSNRNPEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEDRRARRDAGHSLNDRVGDGLKEEATVSVDDSMLENGMCANETRSNPQIEKQ 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02341 502 MobiDBLite consensus disorder prediction 75 99 - -
Pste1g02341 502 MobiDBLite consensus disorder prediction 34 108 - -
Pste1g02341 502 CDD STKc_IRAK 177 443 - -
Pste1g02341 502 ProSitePatterns Protein kinases ATP-binding region signature. 177 199 IPR017441 GO:0005524
Pste1g02341 502 Gene3D Transferase(Phosphotransferase) domain 1 247 460 - -
Pste1g02341 502 SMART serkin_6 171 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02341 502 MobiDBLite consensus disorder prediction 448 479 - -
Pste1g02341 502 MobiDBLite consensus disorder prediction 34 48 - -
Pste1g02341 502 PANTHER OS01G0323000 PROTEIN 114 459 - -
Pste1g02341 502 Pfam Protein kinase domain 174 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02341 502 SUPERFAMILY Protein kinase-like (PK-like) 147 443 IPR011009 -
Pste1g02341 502 FunFam Putative receptor-like serine/threonine-protein kinase 247 457 - -
Pste1g02341 502 MobiDBLite consensus disorder prediction 448 502 - -
Pste1g02341 502 ProSiteProfiles Protein kinase domain profile. 171 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02341 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Pste1g02341 502 Gene3D Phosphorylase Kinase; domain 1 149 246 - -
Pste1g02341 502 FunFam Probable serine/threonine-protein kinase At1g01540 151 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02341 Pste-Chr1 8108873 8111903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02341 148 445 Trihelix Transcription Factor Family AT1G70460 47.195 5.23e-89 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pste1g02341 Pkinase 6.8e-47 CL0016