Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02322 ATGAGGGCGGGGAAAGGGAACCAGGAAGAAGATGAGTACGAGGAAGATGATTTCGGTTCTTCCAAGAAACAAGGCACTTCCTCTGCCCCTAACGCCAACAAAGATGGAAAAGCCATCGATAAGGCTAGTGCAATAAGATCGAAACATTCTGTGACCGAGCAGCGAAGAAGGAGCAAGATAAATGAGAGATTCCAGATATTGAGGGATCTCATACCTCATAGTGATCAAAAGAGGGACACGGCATCATTTTTATTAGAGGTGATTGAGTATGTTCAGTACTTACAGGAGAAGGTACAAAAGTATGAAGGTTCATATCAAGGTTGGGGTCAAGAGACATCGAAGTTGATGCCATGGAGGAATAGTCATTGGCGTGTCCAAAGCTTTGCTGGTCAACCTGCAGCTATAAAGAATGGTTTGGGTCCGGTATCACCTTTTCCTGGAAAGTTTGATGATAGCAATGTTAGTATCTCTCCAACTATGCTTAGTGGCACCCAGAACACTATAGATCCTGATCAGAGCAGAGATATTGCCAACAAGACAGCAGAGAAGCAACCTGATTTATCAAGCAAGGGAATACCTCTTCCACTTGGCATGCATGCAAACATGTCAGTTCCTGTCAGAAGTGATGGTGTACTTGCACATCCTCTTCAAGGAACTGTTTCTGATGCACAATCAACTGAATGCCCAACAACTAGTGAACCACAGAACCAGCAGGATGAACTTACGTTTCACAAAAATCATGATATGATGCTTGATAATTGTAAGGCTAGATGTATGTTGATTTTATGTTCCCTGTTGTTGAATAATCTAACTCAAGCGTTACAAAGTGCTGGTTTAGATCTGTCACAGGCCAGCATCTCAGTTCAGATTAATCTTGGGAAACGAGCTACCAAAGGACTAAGTTGTGCGACCTCTTCTCTCCAGAATCATGACAACCCTCCTTCAAACAATCAAACAATTGCACATTTAAGAGATGCGGGCAGTGGAGAAGACTCGGATCAACCACAAAAACGAATGAGAACATATAAGTGATATATGTGGTGTTTTCATTAGCATCCACTTGCATCCAGATTTCTCACTTGTTCCTGGCACAGCATATCGCATGTGGCTACTGTACATCCTTCCCCATTCGTTTGACTTTTAATTGTTATATTAAAACTATATCAACCTTGAAAATGATCATTTGTGGAAATATTGAGGCTTCTACTGTAGTGGGGCATGTCTTCTATTTTGCTTGTATGATACATATTATAATTATAGTTATTCAGTATTATTGAGATTTTTCTTGGCAATTTTATGATATATATATTTGGTTATTTGGAATCTGTTTGGAAA 1335 0.403 MRAGKGNQEEDEYEEDDFGSSKKQGTSSAPNANKDGKAIDKASAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGWGQETSKLMPWRNSHWRVQSFAGQPAAIKNGLGPVSPFPGKFDDSNVSISPTMLSGTQNTIDPDQSRDIANKTAEKQPDLSSKGIPLPLGMHANMSVPVRSDGVLAHPLQGTVSDAQSTECPTTSEPQNQQDELTFHKNHDMMLDNCKARCMLILCSLLLNNLTQALQSAGLDLSQASISVQINLGKRATKGLSCATSSLQNHDNPPSNNQTIAHLRDAGSGEDSDQPQKRMRTYK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02322 343 MobiDBLite consensus disorder prediction 304 343 - -
Pste1g02322 343 CDD bHLH_AtBIM_like 43 119 - -
Pste1g02322 343 MobiDBLite consensus disorder prediction 304 323 - -
Pste1g02322 343 FunFam BHLH domain class transcription factor 42 114 - -
Pste1g02322 343 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 44 94 IPR011598 GO:0046983
Pste1g02322 343 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 5 341 IPR044295 GO:0003700|GO:0006351|GO:0046983
Pste1g02322 343 MobiDBLite consensus disorder prediction 326 343 - -
Pste1g02322 343 Pfam Helix-loop-helix DNA-binding domain 46 95 IPR011598 GO:0046983
Pste1g02322 343 SMART finulus 50 100 IPR011598 GO:0046983
Pste1g02322 343 MobiDBLite consensus disorder prediction 39 57 - -
Pste1g02322 343 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 42 115 IPR036638 GO:0046983
Pste1g02322 343 MobiDBLite consensus disorder prediction 1 57 - -
Pste1g02322 343 Gene3D - 42 116 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02322 Pste-Chr1 8021259 8025907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02322 1 341 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 51.014 1.56e-106 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste1g02322 HLH 1.9e-13 No_clan