Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02320 ATGGCAGATGGTGAGGATATTCAGCCACTCGTCTGCGATAACGGAACTGGAATGGTCAAAGCTGGATTTGCTGGGGATGACGCTCCACAGGCTGTGTTTCCTAGCATTGTTGGTCGTCCCCGTCACACAGGAGTGATGGTTGGCATGGGTCAAAAGATGCATACGTTGGGGATGAAGCTCAGTCAAAGAGGTATATTAACTCTTAAATATCCCATTGAGCATGGTATTGTGAGCAATTGGGATGACATGGAGAAGATCTGGCATCACACCTTCTACAATGAACTCCGAGTTGCTCCTGAGGAGCACCCGGTTCTGCTCACCGAAGCACCTCTCAACCCAAAGGCTAATCGTGAGAAAATGACCCAAATTATGTTTGAGACCTTCAATACCCCTGCCATGTATGTTGCCATCAGGCCGTTCTATCCCTGTATGCCAGTGGTCGTACAACTGGTTAGTATCGTTCTAGACTCTGGAGATGGTGTCAGCCATACCGTTCCCATTTATGAGGGCTATGCTCTCCCTCATGCCATTCTCCGTCTTGACTTAGCAGGACGTGATCTCACTGATGCCTTGATGAAAATCCTTACAGAACAGGGTTATTCTTTCACCACCACAGCTGAGCGTGAAATTGTAAGGGATGTAAAGGAAAAGCTGGCTTATATTGCCCTTGATTATGAGCAAGAGCTTGAAACATCAAAAACTAGCTCTGCTGTTGAGAAGAGCTATGAATTGCCTGATGGACAGGTGATCACAATTGGTGCTGAGCGATTCCGATGCCCTGAAGTTCTCTTCCAACCATCCATGATCGGAATGGAAGCTGCTGGCATTCACGAGACAACTTACAATTCAATCATGAAGTGTGATGTCGATATTAGGAAGGACTTGTATGGAAACATTGTTCTCAGTGGTGGCTCTACCATGTTCCCTGGTATTGCTGACAGAATGAGCAAGGAAATCTCAGCTTTGGCCCCAAGCAGCATGAAGATTAAGGTGGTTGCTCCACCTGAGAGAAAGTACAGTGTCTGGATTGGTGGCTCAATCTTAGCTTCTCTCAGCACTTTCCAACAGATGTGGATTGCAAAGGCTGAGTACGATGAGGCTGGTCCTTCAATTGTACACAGGAAATGCTTCTAAATGCTGCAGGTTGGTTTGGTGAAAGGAAATACGGCGTCCTCGTTTTATATTATAAAAAATCGTGATGTTATCAGTTAACTGAGTTTATGGCAGAGTAAATTCTTTCATTTATTTTTGTTTCAATATTGGCAATTGTTCAACGGTTGATCTTTAGTTTGGACTATAAAAATCAACGCCGTTCAACGTGTAGTTGGCGCACCC 1335 0.4509 MADGEDIQPLVCDNGTGMVKAGFAGDDAPQAVFPSIVGRPRHTGVMVGMGQKMHTLGMKLSQRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIRPFYPCMPVVVQLVSIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTEQGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDEAGPSIVHRKCF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02320 377 PANTHER ACTIN 9 370 IPR004000 -
Pste1g02320 377 FunFam Actin, alpha skeletal muscle 3 160 - -
Pste1g02320 377 SUPERFAMILY Actin-like ATPase domain 152 377 IPR043129 -
Pste1g02320 377 FunFam Actin, alpha skeletal muscle 331 377 - -
Pste1g02320 377 ProSitePatterns Actins and actin-related proteins signature. 105 117 IPR020902 -
Pste1g02320 377 SMART actin_3 7 377 IPR004000 -
Pste1g02320 377 PRINTS Actin signature 62 84 IPR004000 -
Pste1g02320 377 PRINTS Actin signature 238 254 IPR004000 -
Pste1g02320 377 PRINTS Actin signature 142 161 IPR004000 -
Pste1g02320 377 PRINTS Actin signature 28 37 IPR004000 -
Pste1g02320 377 PRINTS Actin signature 116 129 IPR004000 -
Pste1g02320 377 FunFam Actin, muscle 182 273 - -
Pste1g02320 377 Gene3D Actin; Chain A, domain 4 182 273 - -
Pste1g02320 377 FunFam Actin, alpha skeletal muscle 255 330 - -
Pste1g02320 377 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
Pste1g02320 377 SUPERFAMILY Actin-like ATPase domain 5 141 IPR043129 -
Pste1g02320 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Pste1g02320 377 Gene3D - 139 340 - -
Pste1g02320 377 Gene3D - 10 371 - -
Pste1g02320 377 Pfam Actin 5 377 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02320 Pste-Chr1 8012759 8014573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02320 1 377 Cytoskeleton Gene Families AT3G12110 89.947 0.0 703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03338 3 26159397 26161773 Pste1g02320 1 8012759 8014573 PCT