Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02315 ATGGACGAATATGATGAGAAGGTCCACGTGGCAGTTGGGAAGTCGCTTAAGAAAGCCGCGACTTTGCTCCAATGGTGTTTCACCCGTTTCAGCAATGCTCATATTTGCTTACTTCATGTTTACGAACCTTCTACTATGATTCCTTCACCATATTTAAAATTCAAATCTTGTTCAGTGGGGAAATTTCCAGCATCACAAGCTAGTCCTCAAGTTGTGTCTGCTTATAGAATTGAGGAAAGAGAACAGACCAAGGGGCTTCTGGATAAGTACTTGAGCCTTTGCCGTGCAGCTAAGATTAAGGCAAGCAGTGTCATTGGTGAAGCTGATCAAGTCCAGAAAGGGATTGTTGATTTGGTTACTGTGCATAATATCAGGAAGCTTGTTATCGGATCAGTACCAGAAAATTGCATCAATGTCAAAAGGAATTCCAGTAAAGCAAATTATGCTGCCAAAAATGCTCCCCCATTCTGTGAAATATGGTTCGTCTACAATGGTAAGCACATTTGGACAAGAGAAGCTTCTGACACTCCTCGTTCTTTGTCTTCACGTACCCAACCTGAGACTACAACTGCAGAGAGCTTGAGTTGTAGATTTTTTCCAAATGGTACAAATGAACTATTTCATTCTGAATGTTTTCAAACAAATTCTACAAGAACTACAGGAAGTATGGTTCAGAGTGAAATCATTGAAGCAGAAGCTACTTTTTCATCCAAATCATACAGTTATAGTAGTCATTGTTCTCCCCAACATTTGACTGGTTGGCATTTAGATATTCATTCAGAGTTTGAGGAAGCAATTGATAGTCAACTTATTGAAGCCAAAAGAGAAGTTGATGCTGTAACAGACAGGGCACATGCAGAGCGCTTGAAGAGCCAAACGTTGGAACTCAAAGCCATTGAGGCCATTAGTAAGTTTGATAAACAAATGGAAAAGCGACAGCAAGGACTAGTTTCCCCAATTCACTATAGATTGAAGTGCCCAAATTTATTGTTAAGAAGTTTCGCTAGGATAATATTTAATGTATACTCTTTTGATGGTTTTTATCAAGACTTTTGTTCCAACATATTCTTTATTCAGGTAAACTTTTTTGAATCTGCTCATGCACATGAAGTAAAGCTCAGAAAAGAGGCTGAGGATTCACTGAGAGTTACAATACAGGAGCAACAGATGTTCTTGGATGAGAAAGAAGAAATTGTTAGTGAGCTAGAAAGGACAGCAAGAAGTATTTCCCTTCTAGGTAGTTGCGCACATGAAACCAACCAGAAGCGAGATGAAGCTGCAGCTGAACTCTCACTGATTCAAGAATCCATCTCAAACCTGCAGTATGAAAAGCAGCAGCTCATGCAACAGAAAATGGAAGCTCTACGTTGGCTTGAGCGGTGGAAAAGTTGCGGACAAGTTGGAGCGGATCACTGCAATGGGGTCATTGAGATTGCCAAAGAATTCCCTGAGCTTGCCGAATTTTCAGAATTAGATCTTCGAAATGCCACATGCAATTTTTCTGAGAGTTTCAAAGTTAGGGAGGGTGGATATGGTTCTATTTATAAGGGCGAAATGCTGGGTAGAACAGTTGCTATAAGGAAGCTCCATCCACACAACATGCAAGGATCAACAGAGTTTCATCAAGAGGTTCAAGTTCTTGGTGGTGTCCAGCACCCTCATTTGGTTACTTTGCTTGGTGTTTGCCCTGAAGTCTGGTCGCTTGTATATGAGTATTTGCCTCGTGGAAGTCTCCTAGATTATCTATTCCGAAAAAGCAGTCTTTTCCCTTTGACTTGGAACATCCGAGCACGATGGATAGCCGAAATTGCTACAGCTCTTTGCTTCTTACATTCTTCTAAACCAGAAACTATTATCCATGGAGGTCTGACGCTTGAAACTGTCCTTCTTGACTCTGCACTTAGTTGCAAGATATGTGAATTTGGGTTCAGCAGGCTGGTGAAAGAGGAGTCACTTTATCTTCCCAGTTTCCACTTCAGCACTGAGCCAAATCGTTCTTTTACATATACAGATCCCGAGTTTCATAGAACTGGAGTACTAACACCTAAATCTGATATATACTCTTTTGGGCTCATCATTTTGCAACTCCTCACTGGTAGGACTCCAGTTGGTTTAGCTGGTGAAGTACGCAGAGCAGTTTCATGGGGAAAACTATCTTCAATTTTGGATTCTTCAGCTGGAGAATGGAATCCCACTGTGGCAACAAAATTGGTTGAACTGGGATTGCAATGCTGCCAACTTAACAGTAGAGACAGACCAGAGTTAACACCTTCTCTGGTGAGAGAATTGGAACAGTTGCATGTTTCAGAAGAGAGATTGGTGCCATCTTTTTTCTTGTGTCCAATCTTTCAGGAAATCATGCATGATCCTCAAGTTGCAGCAGACGGATTTACTTACGAAGGGAAGGCCATAAGTGAATGGCTGGCCAATGGGCACCAAACTTCTCCTATGACTAATTTAAAACTGAGTCACCTGAATCTTACTCACAATCATGCACTTCGACTTGCTATCCAAGGTTGGCTTTGCAAATCTTGA 2535 0.4126 MDEYDEKVHVAVGKSLKKAATLLQWCFTRFSNAHICLLHVYEPSTMIPSPYLKFKSCSVGKFPASQASPQVVSAYRIEEREQTKGLLDKYLSLCRAAKIKASSVIGEADQVQKGIVDLVTVHNIRKLVIGSVPENCINVKRNSSKANYAAKNAPPFCEIWFVYNGKHIWTREASDTPRSLSSRTQPETTTAESLSCRFFPNGTNELFHSECFQTNSTRTTGSMVQSEIIEAEATFSSKSYSYSSHCSPQHLTGWHLDIHSEFEEAIDSQLIEAKREVDAVTDRAHAERLKSQTLELKAIEAISKFDKQMEKRQQGLVSPIHYRLKCPNLLLRSFARIIFNVYSFDGFYQDFCSNIFFIQVNFFESAHAHEVKLRKEAEDSLRVTIQEQQMFLDEKEEIVSELERTARSISLLGSCAHETNQKRDEAAAELSLIQESISNLQYEKQQLMQQKMEALRWLERWKSCGQVGADHCNGVIEIAKEFPELAEFSELDLRNATCNFSESFKVREGGYGSIYKGEMLGRTVAIRKLHPHNMQGSTEFHQEVQVLGGVQHPHLVTLLGVCPEVWSLVYEYLPRGSLLDYLFRKSSLFPLTWNIRARWIAEIATALCFLHSSKPETIIHGGLTLETVLLDSALSCKICEFGFSRLVKEESLYLPSFHFSTEPNRSFTYTDPEFHRTGVLTPKSDIYSFGLIILQLLTGRTPVGLAGEVRRAVSWGKLSSILDSSAGEWNPTVATKLVELGLQCCQLNSRDRPELTPSLVRELEQLHVSEERLVPSFFLCPIFQEIMHDPQVAADGFTYEGKAISEWLANGHQTSPMTNLKLSHLNLTHNHALRLAIQGWLCKS 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02315 844 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 23 137 - -
Pste1g02315 844 SUPERFAMILY RING/U-box 774 843 - -
Pste1g02315 844 SUPERFAMILY Protein kinase-like (PK-like) 484 756 IPR011009 -
Pste1g02315 844 CDD RING-Ubox_WDSUB1-like 775 830 - -
Pste1g02315 844 SMART Ubox_2 777 840 IPR003613 GO:0004842|GO:0016567
Pste1g02315 844 Gene3D Transferase(Phosphotransferase) domain 1 573 773 - -
Pste1g02315 844 PANTHER OS02G0152300 PROTEIN 8 838 - -
Pste1g02315 844 Pfam Protein tyrosine and serine/threonine kinase 506 756 IPR001245 GO:0004672|GO:0006468
Pste1g02315 844 Coils Coil 430 450 - -
Pste1g02315 844 Coils Coil 385 405 - -
Pste1g02315 844 Gene3D HUPs 3 136 IPR014729 -
Pste1g02315 844 ProSiteProfiles Protein kinase domain profile. 500 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02315 844 CDD STK_N 7 165 - -
Pste1g02315 844 ProSiteProfiles U-box domain profile. 773 844 IPR003613 GO:0004842|GO:0016567
Pste1g02315 844 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 774 844 IPR013083 -
Pste1g02315 844 Gene3D Phosphorylase Kinase; domain 1 475 572 - -
Pste1g02315 844 Pfam U-box domain 774 843 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02315 Pste-Chr1 7996186 8003190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02315 1 841 U-box Gene Family AT2G45910 33.600 4.26e-141 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pste1g02315 PK_Tyr_Ser-Thr 1.9e-32 CL0016