Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02302 AAAGGGGGAATTGATTTATATTGAAAAGTGAGAGTGGATTGACGATTGGGGTGGGTAGTGAAAATGAAGTGCTTCTACTTCTCAAATGGGGAGGAGGAAGAGAGCGTGGGGAGTTGGAGGAAGTCGCGGGTGTCGTGGGCGCGTTCACTGAGCGTGATGGAGACGCGGAGGAGGGAGTTGTCGGAGACGGTGGAATTCGAGGAGTTTCTGGCGCAGAGGAGGGCGAACGAGCTGCGGGTGTTCTCGTTGGGGGCCCTGAAGTGGGCGACGAGGGGGTTCAGCAGGGGGCTGCTGGTGGGAGAAGGGGGGTTCGGGTCGGTGTACCGCGGCGTGGTGGAGGAGATGGAGGTGGCGATCAAGCAGCTTAACCGTAATGGGGAGCAGGGCCACAAGGAGTGGTTGAACGAGGTTAATTTGTTGGGGGTTGTTAAGCACCCCAATCTTGTTCGCTTGCTCGGCTACTGTGCCGATGATGATGAAAGAGGCATTCAGAGGCTTTTGGTTTACGAGTTTATGCCCAATAAGAGTTTGGAACATCATCTCTTTCCCCGACCCCCTTCCCCCATTCTCCCTTTGCCCACCCGCTTCCGTATTGCCCATGATGCTGCCCGCGGTTTGGCTTATCTTCACGAGCAAATGGATTTTCAGCTTATCTTTCGTGATTTTAAGACCTCCAACATCCTACTCGACGACAATTTCAATGCTAAGCTTTCTGATTTTGGACTCGCTAGGCAAGGCCCCCCACAGGGCTCTGCCTATGTTTCAACAGCAGTTGTTGGCACCATAGGTTATGCTGCTCCAGAGTATGTTCAGACTGGTAAGCTAACTGCTAAGAGTGATGTCTGGAGCTTTGGTGTCGTTCTTTATGAGCTAATCACTGGGAGGAGAGCTTTAGAGAGAAACCTACCTAGAAATGAACAGAAGCTTTTGGATTGGGTAAGACCTTATGTTTCTGATCCTAGGAAGTTCCATCATATTGTAGATCCCCGACTTCAGGGACAATACTGCATCAAATCAGCTCATAAACTCGCCATCCTAGCAAACAAGTGCCTCATGAAGCACCCAAAGTCTCGTCCAAAAATGAGTGAGGTCGTCGAGTCTCTAGGAACCATTATCAATTCCACACTTCCTCCTGATGAAGAAAAGGATTACAACTTATCTCTCCAACCTGAACCATCTAAACAAGCCAACTCTTACCTGAAGAAGGTTTGTCAACTCAAAGACACAGCCAGCTTAAGAAACAAGTCTATTGGAAGGTTGGATTGGAAAAGTTGGGCCCCTGGGATAGTAAGAACTACTTTGTCATAATTCACCTGTATATCATGCAAAGCACAATCTTTAACTACAGTAACCTGATCATCGCCATGTTTCTTGATCACATAGTTTTCGGTTAGTGAAATCGACATTGTCAGGCACACACTTAACATGCTGCTAGATACCCAATTTTGTATCATTTAATAATTGTATGTACAGGTTCATTTGGAGGATAACATTTATTATTAAATCATCTGGTCTTCTCTAAACAAACAACGGATTTTGTCTTGTAAATCAAGATGTAGGTAATAACTGGAATTAAATGTTTCAGCTATACTCGTTTGAGCCTTGCATCTTGCATGTTATCCTGTTTTCCATATAAAAGATAAATGTACTGCAAATCTAAAATAGCTCTCAGCATAGAACACGCCTGTTTCACTTCTCTGTGTTTTCATTTCATGTAA 1718 0.4575 MKCFYFSNGEEEESVGSWRKSRVSWARSLSVMETRRRELSETVEFEEFLAQRRANELRVFSLGALKWATRGFSRGLLVGEGGFGSVYRGVVEEMEVAIKQLNRNGEQGHKEWLNEVNLLGVVKHPNLVRLLGYCADDDERGIQRLLVYEFMPNKSLEHHLFPRPPSPILPLPTRFRIAHDAARGLAYLHEQMDFQLIFRDFKTSNILLDDNFNAKLSDFGLARQGPPQGSAYVSTAVVGTIGYAAPEYVQTGKLTAKSDVWSFGVVLYELITGRRALERNLPRNEQKLLDWVRPYVSDPRKFHHIVDPRLQGQYCIKSAHKLAILANKCLMKHPKSRPKMSEVVESLGTIINSTLPPDEEKDYNLSLQPEPSKQANSYLKKVCQLKDTASLRNKSIGRLDWKSWAPGIVRTTLS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02302 414 ProSitePatterns Protein kinases ATP-binding region signature. 78 99 IPR017441 GO:0005524
Pste1g02302 414 PANTHER OS01G0588500 PROTEIN-RELATED 54 349 - -
Pste1g02302 414 CDD STKc_IRAK 78 347 - -
Pste1g02302 414 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 151 360 - -
Pste1g02302 414 Pfam Protein kinase domain 77 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02302 414 SUPERFAMILY Protein kinase-like (PK-like) 55 347 IPR011009 -
Pste1g02302 414 Gene3D Transferase(Phosphotransferase) domain 1 151 367 - -
Pste1g02302 414 ProSiteProfiles Protein kinase domain profile. 72 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02302 414 Gene3D Phosphorylase Kinase; domain 1 52 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02302 Pste-Chr1 7931194 7933080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02302 58 348 Glycoside Hydrolase AT3G07070 50.680 2.15e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste1g02302 Pkinase 6.4e-47 CL0016