Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02299 ATTTTTTTGAGTAATATAAAAGAAAGAGAGAGAGAGAGAGAGATTGGAGAAGGTGGAATGCTTTCGGCTAAGCTTGCTGAAACTGGCCTCGTCTATGCTGTATTGGGCAGTTAGGGGAATACAAAGATCTTTGAACACTTCCTTCTTTATTACCTTTTTCCAACACCTACCTCTTTCTCTCTCACACTCGTCCTAGGTTTGATTTTTTCTTCCTTCACCCAATACTCCTCTCCAATATTTTATTCTCTGGGCCTTTTTCATTTTTCTTCTCCTCTGCCTACCTATATGCCTCTGTAAGAAGACCAACTGAGAAGCCCTTCAAAATGTGGGATCTGAATGACTCCCCCGATCAGAGAAAGGACTACGAATCCGAAGGGTGTTCTTCTTCCCTCAATGATGATAAAGGCAAGAGAGTGGGATCTGTTTCCAATTCAAGCTCCTCTGCGGTCCTCCTAGAAGATGGATCGGAAGAAGAAGACAGTGACAGAGCTGGAAACGCAACATTGGACAAAACAAGCAGCAAAATATTCGGCTTCTCGGTCACCCACGATGACAGTAACCACCTGCCAGTAACCCGCCAGTTTTTTCCGGTTGAGGATTCCGAGCAGCCCGTCTCCGCCGCCGCTGCCCCCGGAAGTTCATTCCCTCGTGCTCACTGGGTTGGCGTCAAATTTTGTCAGTCGGAAACACTCGGGGCCGGAAAAGCAGTGAAAGTGTCGGAGCCGATGAAGAAGAGTCGCCGAGGACCACGCTCGCGTAGTTCACAGTATCGCGGAGTTACCTTTTACAGAAGAACCGGTCGATGGGAGTCTCATATATGGGATTGTGGAAAGCAAGTATATTTGGGTGGATTTGACACAGCACATGCAGCTGCTCGTAAGTTTTCGCTTATCTCTCTGCCCAGTGCGTACGATAGAGCTGCCATTAAGTTCCGCGGGGTGGAGGCAGACATCAATTTCAACATCGAAGACTATGAGGAAGACTTGAAGCAGATGAGCAATTTAACAAAGGAAGAGTTTGTGCACGTACTTCGCCGACAAAGCACTGGATTTCCTAGAGGAAGCTCCAAATATAGAGGTGTAACTTTGCATAAGTGCGGAAGATGGGAAGCTCGAATGGGCCAATTTTTGGGCAAAAAGTACGTTTATCTGGGTTTGTTTGACACCGAGATTGAAGCTGCCAGGGCGTATGACAAAGCGGCAATAAAATGCAACGGCAAAGAGGCTGTCACCAATTTTGACCCCAGCATCTATGATAATGAACTTAATTCTGAATCCTCAGGTGTAGCTGCAGATCACAATCTGGATTTGAGTTTGGGCAATTCTAGTTCTAAGCATAGTAATAGTCAATCTTCAGGAAATAAATTTTCAAATTCTGCAACCGATCAGCAAATGGCACCTGAATCTAATTGGCGCAATGGGGGAGGCAAGCCTAAGGTTCATCTGGTAAATATACTACCAAAACCATGTGGTAGAAACAGTATGGAGGGGTATGCAAGGGATGGGCATGGAGAGAGTGAAAGCTTGAGGCTGCTAAGCCAAACTCACCTTCAATCCCCATCCACTAAAGAAATGCATAGATATGGTCCGTATAGGTCGCCTGCAGAGCCTCACAATTTTGCACGTCTTCAACCACCAAATTTTCATGTTCCTAGCAGCAGCATTGGAGGCCGTATTGGAAGTGATCTTTCATTATCGATGTCTGATCAACAACAATGGCAAGCCGGGCCTCCACATTTGTTAGCAACTGCTGCAGCATCATCAGGATTCCCACCGCAGATTAGTAGACCCTCCCAAAGTTGGCTGCAGAAAAATGGGTTCCACTCTCTCATGAGACCCTCATGACCCTTGAGATTATTTCTACCTTGCCATTTTGCATTAAAAAATAATTAATGTCCCCTATTTTGTATTCTGAGCATGTACAAGTGAAGTGATGCAATTTAGATTATTGATTATGTCCAACCTCCCCCTTCTTTTTAGGAAAGCCCATACACAACTGTAATTTTACTATTGGGGTGAAAGAAGGGATGAAAGAAAAGGGAAAGCCAAATTGGGAACTCACTGGACTTTGTATTGGCTAGTCAAACTAACCAACGGATGAAATCTTTAACTAGATACTAGATATTCTGGGCGCTGAC 2137 0.4497 MWDLNDSPDQRKDYESEGCSSSLNDDKGKRVGSVSNSSSSAVLLEDGSEEEDSDRAGNATLDKTSSKIFGFSVTHDDSNHLPVTRQFFPVEDSEQPVSAAAAPGSSFPRAHWVGVKFCQSETLGAGKAVKVSEPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARKFSLISLPSAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYDNELNSESSGVAADHNLDLSLGNSSSKHSNSQSSGNKFSNSATDQQMAPESNWRNGGGKPKVHLVNILPKPCGRNSMEGYARDGHGESESLRLLSQTHLQSPSTKEMHRYGPYRSPAEPHNFARLQPPNFHVPSSSIGGRIGSDLSLSMSDQQQWQAGPPHLLATAAASSGFPPQISRPSQSWLQKNGFHSLMRPS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02299 506 MobiDBLite consensus disorder prediction 480 499 - -
Pste1g02299 506 ProSiteProfiles AP2/ERF domain profile. 148 213 IPR001471 GO:0003700|GO:0006355
Pste1g02299 506 MobiDBLite consensus disorder prediction 475 506 - -
Pste1g02299 506 FunFam AP2-like ethylene-responsive transcription factor 248 308 - -
Pste1g02299 506 MobiDBLite consensus disorder prediction 326 376 - -
Pste1g02299 506 MobiDBLite consensus disorder prediction 129 148 - -
Pste1g02299 506 MobiDBLite consensus disorder prediction 1 61 - -
Pste1g02299 506 Gene3D AP2/ERF domain 248 307 IPR036955 GO:0003700|GO:0006355
Pste1g02299 506 Gene3D AP2/ERF domain 147 215 IPR036955 GO:0003700|GO:0006355
Pste1g02299 506 SUPERFAMILY DNA-binding domain 147 214 IPR016177 GO:0003677
Pste1g02299 506 PRINTS Ethylene responsive element binding protein signature 288 308 IPR001471 GO:0003700|GO:0006355
Pste1g02299 506 PRINTS Ethylene responsive element binding protein signature 250 261 IPR001471 GO:0003700|GO:0006355
Pste1g02299 506 MobiDBLite consensus disorder prediction 1 24 - -
Pste1g02299 506 MobiDBLite consensus disorder prediction 26 44 - -
Pste1g02299 506 SMART rav1_2 249 312 IPR001471 GO:0003700|GO:0006355
Pste1g02299 506 SMART rav1_2 148 219 IPR001471 GO:0003700|GO:0006355
Pste1g02299 506 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 80 404 - -
Pste1g02299 506 CDD AP2 248 308 IPR001471 GO:0003700|GO:0006355
Pste1g02299 506 SUPERFAMILY DNA-binding domain 248 308 IPR016177 GO:0003677
Pste1g02299 506 MobiDBLite consensus disorder prediction 326 362 - -
Pste1g02299 506 FunFam AP2-like ethylene-responsive transcription factor 147 215 - -
Pste1g02299 506 Pfam AP2 domain 248 297 IPR001471 GO:0003700|GO:0006355
Pste1g02299 506 Pfam AP2 domain 148 185 IPR001471 GO:0003700|GO:0006355
Pste1g02299 506 CDD AP2 148 214 IPR001471 GO:0003700|GO:0006355
Pste1g02299 506 ProSiteProfiles AP2/ERF domain profile. 249 306 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02299 Pste-Chr1 7904159 7907722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02299 1 342 AP2-EREBP Transcription Factor Family AT4G36920 67.227 8.47e-135 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pste1g02299 AP2 3.5e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02299 1 7904159 7907722 Pste1g02299 1 7904159 7907722 ECH
Pste1g02299 1 7904159 7907722 Pste7g01101 7 10110913 10114648 PCT