Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02283 ATGCTCTCCACGGATTCACTTTTAGAAAACTTTCGTGGCTCTGTGAATGGATTCATATTTGAAAACGGTCCTGTTTCCGTGTTTTCAAATCCGACCCCTGCCAGTGAGTTCAAGGTGGATGATTCAGGTTCCCCTTCTGAGTCTGCCGCTGATTCTGGTCCTTCTTCTGGGTCTAGCGCAAACGGAGAACATGGTGAGAGTACTAAGCATTCCAATCCCATTCTCAGATACATAAGTGATATTCTCATGGATGAAGAAGATGATTTGGAGCGCAAACCCTGCATGTTGCAGGATTGTTTGAGACTCCAGGCTGCTGAAAAATCATTCTATGATGCTTTGGTTCATAGTTACCCTTCATCACCTCCTCAATCTCAATTTAATGATAATCCTGATCCAGATGATAATTTAGGTGGAACTACTAGTTCTGAGAGTTTTAGCAGTTATACCACTGATAATTCATGTGAGTCCGATTGGTTTAATAACGCTAGTGAATTTGAGTCATCTTTCCTACGAAGATCTGTAATTGATTCTCCTGAACACGCCTATGTAGCTCCTGATCTGTTTAGAGAGACACAGGCTGGGTTTCATTTTTCAAATGGAACCTGGAATTTTATTCAAAAGCAGAATAAGGCATGCGTGATTGAGGATGGTGTCATGCCTGGTTCTGTAACAGCTACAGGATTGAGGGAGAAGAGGAGCCATCACATGAATGATATCTCTCATGAAGAAGAGGAGAGAAGCAACAAGCTTTCAGCTGTTTACTCTGATGATTCAGAGCCATCAAGCATGTTTGATGAGGTGCTACTTTGTAGGGATGGTAAGAGTCCGGCCATTTTTCATGCTGAGCGTAAACCACCACCATTGCAGATTGCTGACTCAGGAGGATTGAATGGAAAGAAATCACGGTCGAAGAAAGGTGTCAAAAAGGGGACAAGTGGAAGTGCAACAGTGGATTTATGGACTTTGCTAACTCAATGTGCACAGGCTGTAGCTAGCTTTGACCAAAGGACCGCAAATGAAATACTCAAGCAGATTAGGCAGCACTCTTCACCATATGGCGATGGACTTCAGCGCTTGGCTCATTACTTTGCTGATGGCCTTGAGTCACGCTTATCTGCTGGGATACCAAAGTTCATTCTCTTTCAGTCAGCATCTGCGGCAGATATGTTAAAAGCTTACAGAGTTTATATAACAGCAGCGCCATTTCACAGGATGTCAAATTTCTTGGCTAACCGCACTATTCTGAAGCTAGCACAAAACGAAAGCAGTCTTCACATTATTGACTTTGGGATTAACTATGGTTTCCAGTGGCCTTGCCTCATCCAACGGCTTTCAGAGAGGGCTGGTGGGCCCCCTAAACTTCGAATGACAGGAATTGATCTTCCTCAGCGAGGATTTAGGCCGGGGGAAAGGGTTGAGGAGACAGGACGGTGGCTGGAGAAGTACTGCAAGAGGTTTGGTGTCCCATTTGAGTACAATTGCCTTGCACAGAAATGGGAAACTATAAGACTTGAGGACCTCAAAATTGATAGGAGTGAAGTAACGGTGGTTAACTGCTTGTACAGATTGAAGCACCTGTCCGATGAAACTGTGACTGCCAACTGTCCAAGAGATGTTTTGCTGAGGTTGGTCAGGAAGATCAATCCAAACATCTTCATGCATGGGGTTGTGAATGGCACTTACAATGCACCATTTTTCCTGACAAGGTTCAGAGAAGCACTCTTCCATTTCTCGGCATTGTTTGATATGTTTGATGCTAATGTGTCTCGTGAAGATCCATCTAGGCTGATGTTTGAGAAGGGTTTGTTTGGAAGGGATGCCATCAATGTGATATCATGTGAGGGGGCAGAGAGGGTTGAGAGGCCAGAGACCTACAAGCAGTGGCAGGTTAGGAACCAGAGAGCAGGGTTCAAGCAACTTCCATTGGCTCCTGAACTCGTGAATAGAGTAAAGGAAATGGTGAAGAAGGAATATCATAAAGATTTTGTTGTAGATGAGGATGGCAAGTGGGTTTTGCAAGGATGGAAAGGGCGTATTCTTTTTGCTGTTTCTTCTTGGGTTCCTGCTTTAGGAATGACCAACTCCTAA 2088 0.442 MLSTDSLLENFRGSVNGFIFENGPVSVFSNPTPASEFKVDDSGSPSESAADSGPSSGSSANGEHGESTKHSNPILRYISDILMDEEDDLERKPCMLQDCLRLQAAEKSFYDALVHSYPSSPPQSQFNDNPDPDDNLGGTTSSESFSSYTTDNSCESDWFNNASEFESSFLRRSVIDSPEHAYVAPDLFRETQAGFHFSNGTWNFIQKQNKACVIEDGVMPGSVTATGLREKRSHHMNDISHEEEERSNKLSAVYSDDSEPSSMFDEVLLCRDGKSPAIFHAERKPPPLQIADSGGLNGKKSRSKKGVKKGTSGSATVDLWTLLTQCAQAVASFDQRTANEILKQIRQHSSPYGDGLQRLAHYFADGLESRLSAGIPKFILFQSASAADMLKAYRVYITAAPFHRMSNFLANRTILKLAQNESSLHIIDFGINYGFQWPCLIQRLSERAGGPPKLRMTGIDLPQRGFRPGERVEETGRWLEKYCKRFGVPFEYNCLAQKWETIRLEDLKIDRSEVTVVNCLYRLKHLSDETVTANCPRDVLLRLVRKINPNIFMHGVVNGTYNAPFFLTRFREALFHFSALFDMFDANVSREDPSRLMFEKGLFGRDAINVISCEGAERVERPETYKQWQVRNQRAGFKQLPLAPELVNRVKEMVKKEYHKDFVVDEDGKWVLQGWKGRILFAVSSWVPALGMTNS 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02283 695 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 244 682 IPR005202 -
Pste1g02283 695 MobiDBLite consensus disorder prediction 118 148 - -
Pste1g02283 695 Pfam GRAS domain family 321 686 IPR005202 -
Pste1g02283 695 MobiDBLite consensus disorder prediction 31 71 - -
Pste1g02283 695 ProSiteProfiles GRAS family profile. 310 687 IPR005202 -
Pste1g02283 695 MobiDBLite consensus disorder prediction 285 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02283 Pste-Chr1 7789086 7791173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02283 74 689 GRAS Transcription Factor Family AT1G07530 45.152 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste1g02283 GRAS 3.9e-112 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02283 1 7789086 7791173 Pste1g02283 1 7789086 7791173 ECH
Pste1g02283 1 7789086 7791173 Pste3g03358 3 26406788 26409323 PCT