Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02274 CCAAAATGCCCTGTTGAGCGTTAGATCTTACATGCAATCTCTCTGAGTTACCACGGTAACAGGGACCAGAGGAGGAGGTTCCCTTTCTTTCTTTGGTCTTTAACCCCTTTCTCTGGGTTTGATGGCCGTGGAGCTGATGATGGGGGCGGAAGAGAATGCCGTTCGTGAAGCTGCGTCGGGGCTAGAGAGCGTGGAGAAACTCATCCAGTTGCTGTCACACACTGAGCAACAATACCACTCACCCATGGAGATAAGTGAGACCGACTACAGAGCTGTTGCTGACATGGCCGTTTCTAAGTTCAAGAAGGTGATTTCGCTTCTGGGCAGAACCAGAACCGGTCACGCCCGTTTTAGAAGAGCCCCTCTTCCCTCTTCTCCTTCCCAACCTAGAGTCTACCGTGCTACGCCCCTGCAGCAGATCCCGCCACCAACGCCTCACACTCACACTCACACTGTCACTCCCCACTCTTTCATCCCCGACTCTTCCAAGACCATTCATTTCTCCTATTCCTCCGCCGCTAATTCCTTTCTCTCTTCCCTCACCGCCGACACCGACTCTAAACAGCCCTGCTCCTCCTCCCCCCCGCCGCCGCCGCCGCCGCCTCCCCCCATGACTTTCCAGATCACCAATCTCTCTCAGGCCTCTTCCTCCGGAAAGCCTCCTCTTTCCTCTTCTTCCTTCAAGAGGAAGTGTAGCTCTGACAACTTGGCTTCTGCCAAGTGTGGTACTTCGTCTAGCCGATGCCATTGTTCAAAGAAGAGTAGAAAAATGAGGTTAAAGAGAGTGGTGAGGGTACCGGCAATAAGCTTGAAGATGGCCGATATTCCACCCGATGATTATTCTTGGAGGAAATATGGACAGAAACCCATTAAAGGATCCCCTCATCCAAGAGGTTATTACAAGTGCAGCAGTGTTAGAGGATGTCCAGCGCGCAAGCACGTGGAGAGGGCTCTGGATGACCCATCTATGTTGGTAGTCACGTATGAAGGAGAGCACAATCACGCACTCTCTGCAGCTGAAACTACTACTAATCTTATCCTAGAATCCTCTTAACTCATTATTCATCGTTTTCCCATTATGGAGTATATTCTGATCCTGTCATTCATGGCTGTACAATTGAAAATTTTACTCTCGGAGAGCTTTATCTCGAAGGAGATTGATGGGTGTAAAGGGGTTCCATGTTCCTATACAATATTGGATTCCTTTATCTTTTTCTCTTCAAAGGTTTGGACCCGACCGATACTGCATCCATGATCCATGTCGACTATCATTTTTTTCCTTTTTTAAAAGGTGGATATGACTATTGGATTTAATTTAATTCAAATATAAAAGAAGAAAGATGAAGTGGGGCTTTTATTCTACTTTTTGTTTTTAGTTACTTGTATTTGCTTGCTTTACATTTGATGGTGATAAAAATGAATGGGAGAGTTTGGTTGAATGAAAGAGAGGGAGTCAAAGAAGGGAACAACATAAGAGAAGGGACATGTCGTGTTAAAGAGCGTTGACTAAAAGAGAGAGAGTGGTTGGCACTTGGCAGTTGCCAGTTGGACGGCAAATTGCAGGATGTGAATGAAGGGTTTTTAATGCAAAATTTGTTTGGACTGTTTGGCTTCTAGGATAATTGTTGGCTGGAATTTAGTACACTGGATGGAAATCCTTACTCTCGTGGAAAAACCTTTGCCCTTTGCCCAAGTCAAAAAGGGTGGGTGTGTAATTCAATCAGTTGATAAGTTTTATGTTCTAACTACTAGTTTCTGCACGGGATACATTATTAATGATCCTGCCCCATCATTTTACTCTATGCTTCTACTCATTTTCAT 1821 0.4558 MAVELMMGAEENAVREAASGLESVEKLIQLLSHTEQQYHSPMEISETDYRAVADMAVSKFKKVISLLGRTRTGHARFRRAPLPSSPSQPRVYRATPLQQIPPPTPHTHTHTVTPHSFIPDSSKTIHFSYSSAANSFLSSLTADTDSKQPCSSSPPPPPPPPPPMTFQITNLSQASSSGKPPLSSSSFKRKCSSDNLASAKCGTSSSRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHALSAAETTTNLILESS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02274 310 Gene3D WRKY domain 224 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste1g02274 310 Pfam WRKY DNA -binding domain 238 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g02274 310 MobiDBLite consensus disorder prediction 167 189 - -
Pste1g02274 310 SUPERFAMILY WRKY DNA-binding domain 233 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste1g02274 310 MobiDBLite consensus disorder prediction 150 166 - -
Pste1g02274 310 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 302 IPR044810 GO:0003700
Pste1g02274 310 SMART WRKY_cls 236 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g02274 310 ProSiteProfiles WRKY domain profile. 231 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste1g02274 310 FunFam WRKY transcription factor 65 220 297 - -
Pste1g02274 310 Pfam Plant zinc cluster domain 188 234 IPR018872 -
Pste1g02274 310 MobiDBLite consensus disorder prediction 95 117 - -
Pste1g02274 310 MobiDBLite consensus disorder prediction 141 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02274 Pste-Chr1 7731510 7733809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02274 1 294 WRKY Transcription Factor Family AT2G24570 45.652 5.69e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste1g02274 WRKY 3e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02274 1 7731510 7733809 Pste1g02274 1 7731510 7733809 ECH
Pste1g02274 1 7731510 7733809 Pste6g03707 6 26292068 26293475 PCT
Pste7g01075 7 9870270 9871939 Pste1g02274 1 7731510 7733809 PCT