Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02271 TTCTTATGTTGCAGCACTGCAGAGAGTGAATCCATCGTCACCACTCACCACACCGCCCCAACAACATAGACAGTACTGAAGCAATACCTGGTGCAATTACAACTCCATTTGATTTGGGTACTGTTTTTGTGAATTATTAGTTAAACGAGCTCCTTTGTAACCATGAGTTTTGTCTTCCGAGGGAGTAGGGGAGATATTGAAAGTGGCTTTTCAGAATATGTTCCTGAAAGAACCTTGATGAGGGTCCATCCACCTCGGCCAGTTAATGGCAATTCTCTAGCTTTTCTTATCACAGTTATTTTGATATTCATGATATTAAACTCCCCTCAGATGTTGCATCATTTTTTGCTCTGGGTGGTACTGGCTATCTTTGTGATGGCTACGAGTCTGAGGATGTATGCAACTTGTCAACAGCTTCAAGCACAGGCCAGGGCTCATGCTGCAGCTGCCTCTGGGTTGCTTGGCCATACTGAACTTCGTCTTCACATGCCTCCATCTATTGCAATTGCAACCAGAGGAAGATTGCAGGGACTTAGGCTTCAGCTTGCACTTCTTGATCGTGAATTTGATGAGCTGGATTATGACACTTTGAGAGCTCTGGATTCTGATACTGCTTCTAGTACTCGCTCAATGACTGAGGAAGAGATAAATGCCTTGCCTATTCACACTTACAAAGTTCCAGTCCCACCAAAAGGTGGCTCCGCATGTTTGGCATCATCTTCAGGTGCAGCTGAGATTAAACAAGAATCTGGAGGAACAGAGACAGGTATTAAAGGTCCAGAGGATGAGCTGACATGTACTATATGCTTGGAACAAGTTAAGAGGGGGGAGCTTATTCGTAGCTTGCCATGCTTGCATCAGGTGGTTTGCCTTTGGGATAGGTTTCTTTTATTGTTAAGAGGTATTTCACTATCTATTCAGTTTCATGCCAACTGCATTGATCCATGGCTTCGGCAACAGGGAACTTGTCCTGTATGCAAATTAAGGATAAGGTTAGGAAGTGAAGGAAACAGAGATAGCGAATCCGATGGTTCAGATATTGCGTAATCTGATGGTTCACAATTGACGTATGACTGTAAAATGCGTGATGTGATGCCTTGAGTATGTACGTATGTATATATTATTTACTATTGCCTATTGGTGTATATATTATAGAGATTGGCTTGAGCATATGATTGTAGTCCTCCCTTCACTTAAAAATGGAGTGTAACTATTCTCCTCCGTATCCCGGGATTTCTTAGATGTTCTCTCAGACATTATATTCATATATCAAAATATATAAATAAATAGCGTTTCAAATAGATCTTGTGAATCCATGAAGTCTGTAAGCAAATTTGATGCTAGTAT 1347 0.4143 MSFVFRGSRGDIESGFSEYVPERTLMRVHPPRPVNGNSLAFLITVILIFMILNSPQMLHHFLLWVVLAIFVMATSLRMYATCQQLQAQARAHAAAASGLLGHTELRLHMPPSIAIATRGRLQGLRLQLALLDREFDELDYDTLRALDSDTASSTRSMTEEEINALPIHTYKVPVPPKGGSACLASSSGAAEIKQESGGTETGIKGPEDELTCTICLEQVKRGELIRSLPCLHQVVCLWDRFLLLLRGISLSIQFHANCIDPWLRQQGTCPVCKLRIRLGSEGNRDSESDGSDIA 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02271 294 PANTHER TARGET OF ERK KINASE MPK-1 253 277 - -
Pste1g02271 294 ProSiteProfiles Zinc finger RING-type profile. 212 273 IPR001841 -
Pste1g02271 294 CDD RING-H2_PA-TM-RING 211 273 - -
Pste1g02271 294 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 279 IPR013083 -
Pste1g02271 294 SUPERFAMILY RING/U-box 207 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02271 Pste-Chr1 7709571 7715791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02271 1 293 C3H Transcription Factor Family AT3G55530 64.746 1.31e-120 345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02271 1 7709571 7715791 Pste1g02271 1 7709571 7715791 ECH