LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste1g02269	GTATGCCATTAGCTGCGTACAGCACCCCTTTATGTTGTTATTATTCTTCCATTTAACCACTTGTGATCCAATTAATGTCCCAGATAAAATCCTCCTTAACTGTGGTTCTTATGAAACATCATCATTCGATGGAGTAAATTGGATAGGAGATATTGGACCTAATTTCTTGCCTCTAGATTATGACAAGAGTTCATCTACACTCTTCATCTCAAACATACACTCTCTAGCACCAAAAGTCCCATACTCAACAGCAAGAGTAACTCATTCTCCACTGACCTACTCATTCCCCTTCTCCGCTGGTCCTAAATTCATTGCTTATTTTTCTGTAAAAGCTGGTCCTTACACTCTAGTAAGTAATTTTAACCCATCTGTTTATGCAGAAGAGCGCAGCTTGGAGTTTTTCACCAAGGATTTCTTAGTCAACATCCGGGAAGAGAAATTAAACATTACATTTATTCCATCTAGTTTAATTTCCAATGCATTTTCCTTTGTAAATGGCATTGAGATATTCCCAGTTCCCCACAATATATACTTACCAGGTTCCTGTTCCTTACCTTGGATTACTCATGATGAATATGCTCTAGAGATGCTTTACCGGGTTAGCATTGGTAGTGTGGCTGTTGAAAATGCTTTTGGAACATGGTTGGATGATTTTGGATGCATATCTGGTTCACAATATGGAAGTGTCCTTGGAATAAGGTATCGTGATGCTAGAATGAATTATACCACTTTGACTTCAAAGGATTACAATTATTCAGCACCACAAGAGCTGTATTGGACTGCCAGGACTATGGGTAGCGATGGAGATGCTAATATGAAGTACAATTTAACATGGTCTTTTCCTGTTGATTCTGGATTCAAATACCTTGTTAGGCTTCATTTTTGTGAGATCTCTACGGTGGTAACACGAGTCAACCAAAGGGTGTTCAAGGTGTACATAAACAACCAAACAGCAGAGAAAAGGATGGACGTAGTTGCTTTGGCTGGTAGAGCACTTACACCTCTGTTTAGGGATTATGTTGTTATGATCCCTAAGGAAAGTAGGAGAAGGAAAGATTTGTTGATTGAACTGCACCCTAACTTGAAGTCAAAACCAGAACATGCTGATGCCATACTAAATGGAATTGAGATCATGAAGTTGAGTGACAACAATTATAGTCTTGCGGCAACATTTGAATTGAGAAGGATAATGGAACAAAGGAAAAAGAAAGTTCCACATGTCATTATTGTGGCCGGTACTTTAGGCATCATTTTGGGACTATTCTTTACATTTTTCATTCTTATCCACAGAGCATGGAAAAAATTGAAATGGGGAACTTCTCAGATACTCCCACCAAATTCTACCGGAAGAAGTCACCAAAACATTCAACAAACATTGACCTCAGGTCGTTTCCTCCAATTCACATTAGCAGAGATCAGCATAGCTACCAGCAACTTCAATGAAGCTTTTGTAATTGGGGAGGGAGGCTTTGGAAAGGTGTACAAAGGCATCTTGCATCATAAAAGAACTCCTGTGGCAGAGTTCCAAAATGAGATCAATTTGTTCTCATTTTATCACTTGAATTTGGTGTCACTGCTGGGATACTGCCAAGAAGGAAAAGAGCTGATACTTGTGTATGAGTACATGGCTCAGGGCCCTTTGAGTGATCATTTGTACAAAAAGCAAAAGCAGCCACTGCCGTGGATTCAAAGACTGAAGATTTGTGTTGGCGCAGCTCGAGGACTACATTACTTGCACACAGGCAGGAGCCACCCAGTGATTCACCGTGATATCAAGTCAGCAAACATATTATTGGATCAGAATTGTATTGCGGATTTTGGGTTGTGTAGAACAGTTCCCTCATTTTATCACTCACATGTTAGCACTGAGGTTAAAGGTACATTAGGATATTTAGACCCTGAGTACTATAAGAGAAGAAAACTGACTGAAAAATATGATGTGTATTCATTTGGAGTAGTTTTGTTGGAAGTGTTAAGTGGAAGACCAGTTGTGAATCCTGTGGCAAGAGAAGGGTTGGCCGTGTGGGCCATGCACTGTTATCAATGTGAAACCATTGATCAATTAGTTGATCCGCATTTAGGAGGGAGCGTTAGGCCCGAATGCCTGAGGGCTTTTGTGGATATTGGCATCCAGTGCTTGGCTAATAGAAGTGCAAACAGGCCAACTATGGGAGAGGTGCTTAGTACTTTGGAGAAGATCCTTTCCATGCAAGAATGCTTAGAGCAACAAGAAGTTAATACAATTGCTGATATTGCCCGTGATATTCCTACAGAGAACATAGTTCTCAACTGTGGATCCAGCACATTAGAATTTGTAGAATATGATGGTAGGAATTGGAGTGTGAGTGCTGCTAACTTCACTCTTCTGCATAACTTCAGTGTTTCCCTCAACGCTGATTACTTCAACTTAGTCTATTTCATGAAAGAATTCATTGTCCATGTAAGTGGGAGGGATTTAGAACTCACTTTCACCCCAACATATATTGCTTCTGATGCCTACGCCTTTGTGAATGGGATTGAAGTTGTTTCTATGCCACTTGATTTATACATTCTTGGTGTTGATGCACCTCTTCCTTTTGTTGGCCATGGTCCAAGACTTGCGTACATATATAATGATTTTGCCATGGAAAACTTATATAGATTAAATGTAGGAGGAAGCCGTTGCAAAACTTCCACAACATGTTGTTTGCTTAGGGTAGTAGTTCTAGTTCATTGGATGAGTAAAAAGTTTCCTTGCATACATTCAAGGGAAGAAAAGATAGCACTAGTACTAGTTGGTAGAATATCCCAAAAAAGAAGAAAAACCAAACACAGACTTCGT	2821	0.3977	MLLLFFHLTTCDPINVPDKILLNCGSYETSSFDGVNWIGDIGPNFLPLDYDKSSSTLFISNIHSLAPKVPYSTARVTHSPLTYSFPFSAGPKFIAYFSVKAGPYTLVSNFNPSVYAEERSLEFFTKDFLVNIREEKLNITFIPSSLISNAFSFVNGIEIFPVPHNIYLPGSCSLPWITHDEYALEMLYRVSIGSVAVENAFGTWLDDFGCISGSQYGSVLGIRYRDARMNYTTLTSKDYNYSAPQELYWTARTMGSDGDANMKYNLTWSFPVDSGFKYLVRLHFCEISTVVTRVNQRVFKVYINNQTAEKRMDVVALAGRALTPLFRDYVVMIPKESRRRKDLLIELHPNLKSKPEHADAILNGIEIMKLSDNNYSLAATFELRRIMEQRKKKVPHVIIVAGTLGIILGLFFTFFILIHRAWKKLKWGTSQILPPNSTGRSHQNIQQTLTSGRFLQFTLAEISIATSNFNEAFVIGEGGFGKVYKGILHHKRTPVAEFQNEINLFSFYHLNLVSLLGYCQEGKELILVYEYMAQGPLSDHLYKKQKQPLPWIQRLKICVGAARGLHYLHTGRSHPVIHRDIKSANILLDQNCIADFGLCRTVPSFYHSHVSTEVKGTLGYLDPEYYKRRKLTEKYDVYSFGVVLLEVLSGRPVVNPVAREGLAVWAMHCYQCETIDQLVDPHLGGSVRPECLRAFVDIGIQCLANRSANRPTMGEVLSTLEKILSMQECLEQQEVNTIADIARDIPTENIVLNCGSSTLEFVEYDGRNWSVSAANFTLLHNFSVSLNADYFNLVYFMKEFIVHVSGRDLELTFTPTYIASDAYAFVNGIEVVSMPLDLYILGVDAPLPFVGHGPRLAYIYNDFAMENLYRLNVGGSRCKTSTTCCLLRVVVLVHWMSKKFPCIHSREEKIALVLVGRISQKRRKTKHRLR	930

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste1g02269	930	SMART	serkin_6	469	724	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste1g02269	930	Gene3D	Phosphorylase Kinase; domain 1	435	531	-	-
	Pste1g02269	930	FunFam	FERONIA receptor-like kinase	19	163	-	-
	Pste1g02269	930	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	576	588	IPR008271	GO:0004672\|GO:0006468
	Pste1g02269	930	PANTHER	OS03G0124300 PROTEIN-RELATED	4	426	IPR046957	GO:0004672
	Pste1g02269	930	CDD	STKc_IRAK	475	723	-	-
	Pste1g02269	930	Pfam	Malectin-like domain	64	369	IPR024788	-
	Pste1g02269	930	Pfam	Protein tyrosine and serine/threonine kinase	475	720	IPR001245	GO:0004672\|GO:0006468
	Pste1g02269	930	Gene3D	-	20	162	-	-
	Pste1g02269	930	Gene3D	-	182	371	-	-
	Pste1g02269	930	SUPERFAMILY	Protein kinase-like (PK-like)	442	720	IPR011009	-
	Pste1g02269	930	FunFam	FERONIA receptor-like kinase	182	371	-	-
	Pste1g02269	930	ProSiteProfiles	Protein kinase domain profile.	469	724	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste1g02269	930	Gene3D	Transferase(Phosphotransferase) domain 1	532	751	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste1g02269	Pste-Chr1	7703264	7714886	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste1g02269	764	888	Receptor kinase-like Gene Family	AT3G51550	46.923	1.53e-21	99.0

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Pste1g02269		Malectin_like	8.1e-27	CL0202