Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02257 GGAAAATTTGAAATCCAAACATATAGCCACTTTATTTGAGGCTTTTTTTTTCCTTTCTCAAAGTATGAAATTTAAGATCATTTATACTTAAGAATTTGATGAAATTCCTCGCTGTTCATTCCATTCTCCCTTGAATTTCCAACGCCAAATTGTCGATGACTACAATTAAGCTGCGTTGATCTAAATCCCAAACTTGCGAATCACGTATTTCTCCTTCAAAGATGACAGAACCATTGTTTCCTGCGAAACAGATCGAATAGTCTGCATCGCCACCGATTCACCGAGAGCTGCATTTGGGTGACTCATGGAACCAGCTTCAGTTGATTCTTCATCTCAACTGACTCCTTCAGTTTCTAATACTGAAGAGCAACACTCAACCAAAGTGTCTAGACAAACTGGCAATTCACATGATGCACCATCGTCGTCACCTGCTTCTGGCATATCATCCTGGGCAAGACATCTGAAATTCCCGCAGGGCCTCGGGCTTGGAGCAGCACAACAGGACTCGCAGACCGAAACCACAGGCATGTCAGCTTTTGCTCGCCTGACTGGTGGGCTTGGATTGCGAAAGCCGTCAAATGAAACTGCTCCAGTCAATGTAGGAACCGAGGAATCTAACTTGATTGAATCCTTGACCAAAGGGTTGATGGACTCTTCCAAGAGTGCAGTGAAGGCAGTGCAGGTCAAAGCACGCCATATTGTCTCTCAAAATAAGCGTAGATACCAGGAAGATGGATTTGATTTGGATATGACCTACATCACTGAAAATATAATTGCCATGGGATTTCCGGGTGGTGATTTTAGCTCTGGAATTTTTGGATACATTGAGGGGGAGCTGTGTTTCAGGGGTTCTATCGCAATCACATGGAAGAAGTGATCAAGTTTTTTGAATCACATCACAAGGGAAAGTACAAAGTATACAATCTTTGTTCAGAAAGGTTATATGATGGATCATTATTCCAGGGAAAGGTTGCAACTTTCCCATTTAGTGATCACAATTGCCCTCCTATTCAACTTATAGCATCATTTTGTCAGAGTGCATATTCATGGTTAAAGGAGGATATTCAAAATGTTGTTGTTGTTCATTGCAAAGCTGGTATGGGGAGGACTGGACTGATGATATGCTGTCTTCTTTTGTTTCTTAAGTTCTTCCCAACTGCAGAGGAAGCCATTGATTACTTTAACCATAAAAGATGCATAGATGGAAAGGCTCTAGTCCTCCCCAGTCAGATTAGATATGTAAAATACTTTGAACGGACTTTAACAAACTTCAATGGAGAAGTCCAACCTGGACGAAGGTGCATGCTAAGAGGGTTTCGGCTTCACAAATGTCCTTATTGGGTTAGACCATCTATTACAATTTCTGATCACAAGGGAATACTTTTTACCACAAGAAAGCATCCCAAAACAAAGGATCTAATGCCAGAAGATTTCTGGATAAGTGCACCAAAGAAAGGGATTGTGGTTTTTGCACTACCTGGAGAGCCTGGTCTAGCAGAGTTGATAGGAGACTTCAAAATTCATTTTCATGATCGACAGGGAGAATTCTACTGTTGGATGAATACAACGATGACAGAAAACAGAAAAATTTTAGATGGTGAAGATTTTGATGGTTTCGACAAGAGAAAGATCCCCGCACCAGGATTCAAGGTGGAAGTTGTGATGATAGACTATAATGGCACCCTACCTGCAAGGACAAAATCCAATCCTACCAGCAAAGCATCTGATGGAAACACAAGCAACGCCCTACATGGTGGTCCAAAGCCATCTAATTCAAGTGAGAGCAAAGTCCTTAGAAATGCAGATGATGATGTATTCTCAGACAGCGATGAAGAGGGAACCCGGGATACCAAAAACAAGAAAGCGGCAAATGAGTACAAATTTATGGGACCTCATCAAGTATCTGAGGCAACAACAGACAATGAAAGGATGTTGACGCACTCAACGGATCAGTTGTCACTACAGCACGAGGAACGGAAGCAAAACAATGCTTCTGAAGAATCAGCTACTGATAAACTTGATAAACTTCATGCAGACAATAATAGCGCAAACATGGGATCTGTAGGGCAAGCGATATCAAGGCAATTGCAGCAGATGCTTCAGTTTTGCCTTTGGAGATGAAGATTTTGACAGTGATTGAAAGGAAGTGGGATGAACTATTGATTGATTTCAATACTATCTAAGAAAAGGCATCAGGCGTTATGGAATTCATTGGTTTGCCCCAATTTGTTGTCGTCAAATGAACGTTCCTGTATTTTATCATTTTTAAACTTTATATATTTAAGATTTCATATGTTGACATTATTCTTTCAAGTTTTCTACGTGATTTGCTCCACTCTCCCCTATGGGCTCTGGAGAATTCCTCAAATAATAAATTGTGAGTCCAAGTCAAAAGGTAGCAAGTACCAGAGACCAGCATCTCTTACCAAAATGACAATACTCGGTACCAAATCCAAC 2457 0.409 MEEVIKFFESHHKGKYKVYNLCSERLYDGSLFQGKVATFPFSDHNCPPIQLIASFCQSAYSWLKEDIQNVVVVHCKAGMGRTGLMICCLLLFLKFFPTAEEAIDYFNHKRCIDGKALVLPSQIRYVKYFERTLTNFNGEVQPGRRCMLRGFRLHKCPYWVRPSITISDHKGILFTTRKHPKTKDLMPEDFWISAPKKGIVVFALPGEPGLAELIGDFKIHFHDRQGEFYCWMNTTMTENRKILDGEDFDGFDKRKIPAPGFKVEVVMIDYNGTLPARTKSNPTSKASDGNTSNALHGGPKPSNSSESKVLRNADDDVFSDSDEEGTRDTKNKKAANEYKFMGPHQVSEATTDNERMLTHSTDQLSLQHEERKQNNASEESATDKLDKLHADNNSANMGSVGQAISRQLQQMLQFCLWR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02257 418 MobiDBLite consensus disorder prediction 323 337 - -
Pste1g02257 418 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 71 110 IPR000387 GO:0016311|GO:0016791
Pste1g02257 418 MobiDBLite consensus disorder prediction 274 384 - -
Pste1g02257 418 SMART PTEN_C2_2 141 269 IPR014020 -
Pste1g02257 418 Pfam Protein-tyrosine phosphatase 43 96 IPR000242 GO:0004725|GO:0006470
Pste1g02257 418 ProSiteProfiles Phosphatase tensin-type domain profile. 1 136 IPR029023 -
Pste1g02257 418 MobiDBLite consensus disorder prediction 274 308 - -
Pste1g02257 418 Gene3D Protein tyrosine phosphatase superfamily 1 143 IPR029021 -
Pste1g02257 418 ProSiteProfiles C2 tensin-type domain profile. 143 270 IPR014020 -
Pste1g02257 418 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 3 133 IPR029021 -
Pste1g02257 418 MobiDBLite consensus disorder prediction 346 363 - -
Pste1g02257 418 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 1 386 - -
Pste1g02257 418 MobiDBLite consensus disorder prediction 364 384 - -
Pste1g02257 418 ProSitePatterns Tyrosine specific protein phosphatases active site. 73 83 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02257 Pste-Chr1 7632089 7641854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02257 1 366 Protein tyrosine phosphatase (PTP) family AT3G19420 66.043 0.0 528
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02257 1 7632089 7641854 Pste1g02257 1 7632089 7641854 ECH
Pste1g02257 1 7632089 7641854 Pste4g01020 4 7887817 7894742 PCT