Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02254 ATTCCAATTCCAATTCCAATTCCATCCCTGCCTAGTTTTTCACTCTTGGGATCCAAATCCCATACCGTAACAGTTTCGGTTTGAGATACATAGAGTGTGTCAGAGACGGTTAAATTTGTTTTGACAGTTACAACAAACTGAATGGGGGAAGAGGTGAAGACGAGTGAGTACGAGGAAGAGCGCGTGATGGAGTGGGAGGTGGGTCTCCCGACAGCCAACGATCTGACGCCTCTCTCGCAGCTGCTGATACCGCCGGAGCTGGCCTCAGCCTTCAGCATCTCACCGGAGCCCTATCGGTCCGTACTGGACGTCAACCGAGCGTCGCGCAACACGCTCTCAACGCTCCGAGGCGGCGGCAGCGTCCACCAGGCCTTCTCGTCGTCCAACAAGCATCAGCAGCGGGTGGACGAGGAGGACGAAGGGGGCGGAGACGAGGAGGAGACCGATCGGGAGGGGTCGGGGTCCGATTCCCGGAAGCAGCGGAAGATCGACTGCGTGGCGGAGGAGGCAGACTCGGCGGTGCGGACGGAGGAGAGGACGGCGGTGAAGAGGCCGCGGCTGGTATGGACACCGCAGCTGCACAAGCGGTTCGTGGACGTGGTGGCGCACCTAGGGATCAAGAACGCTGTGCCGAAGACGATTATGCAGTTGATGAACGTGGAAGGGTTGACCCGAGAAAATGTGGCGAGTCATCTCCAGAAGTATCGGCTTTACCTGAAGCGGATGCAGGGATTATCAAACGAGGGTCCTTTTTCTTCGGATCAGCTATTCGCTTCCACTCCTGTCCCTCAGAGTCTTCACGACTCTGCTGCTCATACCCATCCCAACCCTCCTCATCTCCCTGTTCCCATGATGTCCTTGCCCTATCCCCCTCCCATCATGTCCATGCCTGTCCTCGGCATGCCCCATAGCCACATGCCCATCCCCATCCCTTCTTCTTCCGCCACCTCCGCTTATCATCCTTATAACTTGTTGCATCAAAGGGATTGGCCTCATCTTGCTCCTAACGATAAATGA 1017 0.5654 MGEEVKTSEYEEERVMEWEVGLPTANDLTPLSQLLIPPELASAFSISPEPYRSVLDVNRASRNTLSTLRGGGSVHQAFSSSNKHQQRVDEEDEGGGDEEETDREGSGSDSRKQRKIDCVAEEADSAVRTEERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPFSSDQLFASTPVPQSLHDSAAHTHPNPPHLPVPMMSLPYPPPIMSMPVLGMPHSHMPIPIPSSSATSAYHPYNLLHQRDWPHLAPNDK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02254 291 MobiDBLite consensus disorder prediction 104 133 - -
Pste1g02254 291 MobiDBLite consensus disorder prediction 208 224 - -
Pste1g02254 291 Pfam Myb-like DNA-binding domain 141 189 IPR001005 -
Pste1g02254 291 SUPERFAMILY Homeodomain-like 135 194 IPR009057 -
Pste1g02254 291 FunFam Two-component response regulator 133 196 - -
Pste1g02254 291 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 13 259 IPR044841 GO:0003700|GO:0006355
Pste1g02254 291 Gene3D - 133 196 - -
Pste1g02254 291 MobiDBLite consensus disorder prediction 208 228 - -
Pste1g02254 291 MobiDBLite consensus disorder prediction 66 83 - -
Pste1g02254 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 134 193 IPR017930 -
Pste1g02254 291 MobiDBLite consensus disorder prediction 66 133 - -
Pste1g02254 291 NCBIfam myb-like DNA-binding domain, SHAQKYF class 138 190 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02254 Pste-Chr1 7626868 7627884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02254 1 221 G2-like Transcription Factor Family AT3G46640 59.671 6.86e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste1g02254 Myb_DNA-binding 1.1e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02254 1 7626868 7627884 Pste1g02254 1 7626868 7627884 ECH