Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02245 TGATAAATATCTTGTTGGATAGTGTGATGGTCGTCCTTAGTTCTTATTTGTTATTTGTGAGTTGTTAGTTGTTACATCACTCACGGCCAGTGGGCACCATGGCATCCACTACTCTCTTCGATTTTAGCCTCTCTCTGTTCAATCATCAACGCATAAAGAGGCCAAAATCTCTGCTCTCCGCTTCTGGCCCCAATCCACGCCTCGTTTCTTCCATTAACGCTCATTTGGCGGTCACACCTGTCACATTCACATTCACATATCCTAAGCGCAGATTCCACGTTGGAGTGCGCAAGCAGTATTCTGATCAGGAATCCTCTGACTCGCTTCTTTCTGACGTTACTTCCCAAGAGCAATTTTCTTGGTCTTCTGTCATTCTTCCGTACTCACCTGATCTTAGTGGGATAACATGGTTCAATCTTTCTGCCATTCAGCTTGGACTAGTGGTTAGTGGTTCCCTATATGGAGCCCTTGTTGGCTCACTTCTTGCATTTGCCATAGCTGATTTTCTTGGTAGGAAGCAACAACTCATTGCTGCATCCCTGTTGTATGTGTTCGGTGGCGTGGTTACTGCCTATGCACCAGAACTTGGAGTTCTCTTAGCAGGAAGGCTGCTTTATGGACTTGGTATAGGTTTGGCCATGCATGGAGCTCCATTATATATTGCAGAGACTTGTCCATCACAAATCCGCGGTACTCTAGTATCATTAAAAGAACTCTTCATTGTCCTGGGGATTCTGCTGGGTTATTTTGTGGGAAGCTTTCTGATTGATACTGTTGGGGGATGGCGGTTCATGTATGGATTTAGTGCTCCAGTTGCTGTCTTAATGGGATTTGGAATGTGGACTCTTCCCAATTCTCCACGGTGGTTGCTTCTTAGAGCAGTGCAAGGAAAAGGTTCTTTTCAAGATTTGAAGGAAGAGGCAATTGTTTCCCTGAGCAAATTAAGGGGCCGAGCACCTGGCGACAAAGAATCTGAGAGACAAATAGAAGAGACCCTTGTCTCATTGAAGTCTGCCTATGCAGATCAGGAATCGGAGGGGAATTTCTTAGAGGTGTTTCAGGGTCCCAATCTGAAAGGTTTCATAATTGGTGGAGGACTAGTCTTATTTCAACAGATAACAGGTCAACCAAGTGTTCTGTACTACGCTGGTCCAATTCTCCAGAGTGCTGGATTTTCTGCTGCATCTGATGCAACAAAAGTTTCTGTTGTTATTGGCTTATTCAAGTTACTGATGACATGGATCGCTGTGCTAAAAGTTGATGATTTGGGGAGAAGACCTTTGCTGATTGGAGGTGTCAGTGGCATTGCCCTTTCTTTAGTTCTCCTTTCTGCTTATTATAAATTTCTTGGAGAGTTCCCACTTGTTGCTGTTGGAGCTTTACTTCTTTATGTTGGTTGCTATCAGATATCATTCGGGCCAATAAGTTGGCTAATGGTATCAGAGGTCTTCCCACTTCGCACTAGAGGAAAGGGGATTAGTCTCGCTGTTCTTACCAACTTTGCTTCAAATGCTGTTGTCACATTTGCATTCTCCCCATTAAAGGAGCTTCTAGGAGCAGAAAATCTTTTTCTCCTCTTTGGGGCTATTGCTATTCTGTCACTTCTGTTCATTATATTTTCCATCCCGGAGACAAAAGGCTTGAGTTTAGAAGATATAGAATCCAAAATCCTGAAGTGATAACTTAATCTAGCACCTTTTGATGTTAATGCTGTGTATATTTTGGTTAGTCTTCCACCTGTATATATCTCCTGCGTGGAATTTGGTAGTTGTGGAATAGAATGTGGAATATATACCTTCCCGTATTTTTATATTGGTTCATATTTGCGTAAAAATTTGGTTCACATTCCACACGAGTTGGACTATTTCTTTTATCAACTATCACAATGAATAGATCCTTTCATGT 1905 0.4247 MASTTLFDFSLSLFNHQRIKRPKSLLSASGPNPRLVSSINAHLAVTPVTFTFTYPKRRFHVGVRKQYSDQESSDSLLSDVTSQEQFSWSSVILPYSPDLSGITWFNLSAIQLGLVVSGSLYGALVGSLLAFAIADFLGRKQQLIAASLLYVFGGVVTAYAPELGVLLAGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLVSLKELFIVLGILLGYFVGSFLIDTVGGWRFMYGFSAPVAVLMGFGMWTLPNSPRWLLLRAVQGKGSFQDLKEEAIVSLSKLRGRAPGDKESERQIEETLVSLKSAYADQESEGNFLEVFQGPNLKGFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAASDATKVSVVIGLFKLLMTWIAVLKVDDLGRRPLLIGGVSGIALSLVLLSAYYKFLGEFPLVAVGALLLYVGCYQISFGPISWLMVSEVFPLRTRGKGISLAVLTNFASNAVVTFAFSPLKELLGAENLFLLFGAIAILSLLFIIFSIPETKGLSLEDIESKILK 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02245 526 CDD MFS_GLUT10_12_Class3_like 96 520 - -
Pste1g02245 526 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 105 524 - -
Pste1g02245 526 NCBIfam sugar porter family MFS transporter 97 520 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g02245 526 ProSiteProfiles Major facilitator superfamily (MFS) profile. 75 513 IPR020846 GO:0022857
Pste1g02245 526 Pfam Sugar (and other) transporter 62 521 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste1g02245 526 SUPERFAMILY MFS general substrate transporter 92 521 IPR036259 -
Pste1g02245 526 ProSitePatterns Sugar transport proteins signature 2. 172 197 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste1g02245 526 ProSitePatterns Sugar transport proteins signature 1. 130 147 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste1g02245 526 Gene3D MFS general substrate transporter like domains 86 524 IPR036259 -
Pste1g02245 526 FunFam D-xylose-proton symporter-like 3, chloroplastic 80 524 - -
Pste1g02245 526 PRINTS Sugar transporter signature 448 460 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g02245 526 PRINTS Sugar transporter signature 118 128 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g02245 526 PRINTS Sugar transporter signature 425 446 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g02245 526 PRINTS Sugar transporter signature 338 348 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02245 Pste-Chr1 7574592 7578146 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02245 15 526 Organic Solute Cotransporters AT5G59250 67.712 0.0 709