Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02224 ATGGATGGGGGACACATGGCGCCGACGCCACGCAGCATGAGCATGATGCAGCATAAGATGAAGATGCACATGACCTTCTTCTGGGGTAAAGACACTGAAATTCTGTTCAAGGAGTGGCCCGGGGGCAAATCGGGCATGTACGTGGTGGCCTTGGTGTTGGTTTTCGTGATGGCGGTTTTGGTGGAGCTGCTCTCCCACAGCCGGTTCATGAAACCCGGTTCGAACCATGTGTTGGGCGGTCTGATTAAAACCCTCTTGCACGTCCTGAGGGTTGGTCTGGCCTATTTGATCATGCTCGCCCTCATGTCTTTCAACGGCGGTGTCTTCTTGGCTGCTCTCCTCGGCCACGCCTTGGGCTTTTTCATTTCCGCCGTTGCTTTCTCCAAAACCCCCCAAGATCATCCCTTCGATCTTCCTCCCATTTCTTGTTAG 432 0.5394 MDGGHMAPTPRSMSMMQHKMKMHMTFFWGKDTEILFKEWPGGKSGMYVVALVLVFVMAVLVELLSHSRFMKPGSNHVLGGLIKTLLHVLRVGLAYLIMLALMSFNGGVFLAALLGHALGFFISAVAFSKTPQDHPFDLPPISC 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02224 143 Pfam Ctr copper transporter family 76 122 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pste1g02224 143 Pfam Ctr copper transporter family 24 68 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pste1g02224 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 13 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02224 Pste-Chr1 7449389 7449820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02224 25 143 Inorganic Solute Cotransporters AT5G59030 50.806 8.83e-38 125