Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02220 GGAGGAATGATGAAGAGAAGAGGAGGTGACTGAAATCATTCACTGCAGTCTGCAGCAGAGGAAAGAAAACCTTTGGATCCCAAAAAAGTCATCTTTTTTCCCACCCACTTTCTCTCTTCCCAAACACCGCCGTATTTCGCTTTCTCCTTTCTTTTATCCCTTCCATGCCATACTCATACTCATACTTGTCTTCTCTTCTTTTTTAATCTTATCGCTCTAACCCCTTCACTCATTAAAGAGCAGAAACAACTACTGTTGGGTCTCATTCACCAACGCTCCTTTTCTCTCGAGTGATTGCACTCTCGCCAATGGGAGCTCGTTGCTCTAAATTCTCTCTCTGCTGGTGGCCTTCCCACATCAAATCAAACCTTCACAACTTGTCTGATGATGATGAGAAAAAGAATGAGAAGGATCCTTGGGGAGGGTTCAGTGAGTACAGTATGGATCAGTTAAGAGTTGCAACCTCAGGTTTTTCACCTGACAACATTGTCTCGGAACACGGTGAGAAGGCTCCCAATGTTGTCTACAGAGGGAGGCTTGAAGATGATAGGTTGGTTGCTGTTAAGCGCTTCAACAAATCTGCTTGGCCTGATTCTCGACAATTCCTAGAGGAGGCACGTGCTGTGGGGCAGCTAAGGAATGAACGATTAGCTAACTTGGTTGGGTGTTGCTGTGAGGGAGAAGAGAGGTTGCTTGTTGCAGAGTTCATGCCCAACGAAACTCTCTCTAAACATCTTTTTCATTGGGAAGCCCAGCCTATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATTTAGCTCAAGCTTTGGAATACTGCAGCAGTAAAGGAAGGGCATTGTACCATGACCTTAATGCTTATAGAATTTTGTTTGATCAGGAAGGCAACCCTAGACTCTCTTGTTTTGGACTAATGAAAAACAGTAGGGATGGCAGAAGCTATAGTACAAATTTAGCCTTCACTCCTCCAGAGTACTTGAGAACTGGAAGGATCACCCCTGAAAGTGTAGTTTACAGTTTTGGCACCCTCTTGCTTGATCTTTTGAGTGGAAAGCATATCCCACCCAGTCATGCACTTGACCTTATTCGAGGCAAAAATTTTCTGTTGCTAATGGACTCATGTTTGGAAGGTCATTTTTCAAATGATGACGGAACCGAATTAGTGAGATTAGCTTCACGTTGTTTACAGTATGAACCTCGTGAGAGACCAAATGTTAAGTCACTTGTGACTGCTCTAACACCACTTCAGAAAGAAACTTCGGTACCATCATATGTGTTAATGGGCATACCAGATAGGAATCTGTCATCAAAGGAAACAGTTTCATTGACACCTTTTGGTGATGCTTGCTCAAGAAGAGATCTGACTGCAATACATGAAATTTTGGAAAAGGTTGGCTATAAGGATGATGAAGATGTTGCAAATGAGCTATCCTTCCAAATGTGGACAAATCAAATACAGGAAACTCTAAATTCTAAGAAGCAAGGCGATTCTGCTTTTCATGCTAGAGACTTCTCCACGGCCATTGACTGCTATACACAATTCATCGATGGTGGAACTATGGTATCACCAACTGTGTATGCCAGGCGCTGCTTATGTTACCTAATGAATGAGATGGCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAATCAATATGTCCCACTTGGCCCACTGCATACTATCTTCAAGCAGCTGCCCTCTTCAGCCTTGGCATGGACAATGATGCACAGGAAAGTCTTAAAGATGGCACAACACTGGAAACCAGAAAGTATAGAAATTGAAACTGTATAGTATTTTTCCTTTCTTCTACTTCCCCTCATTGATCAAGCAAAATTTTCATATATTACTGTTAGCTGTATGTAGTAATTTTATATGTGCTTTAGACTCCTAATTGTGATGGCTATGGCTATGGCCGATTCTCTTGTATTTTTGGTCCAATGCTGTTAATCTCGAAATGCTTACATTCTTGTAAAAGATGTCTTTTTGTCTTGTCAGGTATTGCCTCCTACCTAAGTCATATTTGCTGAGCAATTTCACGAGCACAGCAAATTTCGGGGTCCTTTATATCTTAAACCAGTAGGCCTAATTTGTTAGTAACTATCACATTAGGTATTTAATCT 2120 0.4198 MGARCSKFSLCWWPSHIKSNLHNLSDDDEKKNEKDPWGGFSEYSMDQLRVATSGFSPDNIVSEHGEKAPNVVYRGRLEDDRLVAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWEAQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQEGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLLLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNVKSLVTALTPLQKETSVPSYVLMGIPDRNLSSKETVSLTPFGDACSRRDLTAIHEILEKVGYKDDEDVANELSFQMWTNQIQETLNSKKQGDSAFHARDFSTAIDCYTQFIDGGTMVSPTVYARRCLCYLMNEMAQEALGDAMQAQSICPTWPTAYYLQAAALFSLGMDNDAQESLKDGTTLETRKYRN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02220 490 Pfam Protein tyrosine and serine/threonine kinase 71 309 IPR001245 GO:0004672|GO:0006468
Pste1g02220 490 SUPERFAMILY TPR-like 387 486 IPR011990 GO:0005515
Pste1g02220 490 Gene3D Phosphorylase Kinase; domain 1 28 133 - -
Pste1g02220 490 FunFam probable serine/threonine-protein kinase At4g35230 383 490 - -
Pste1g02220 490 ProSiteProfiles Protein kinase domain profile. 58 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02220 490 FunFam probable serine/threonine-protein kinase At5g41260 135 326 - -
Pste1g02220 490 Gene3D Tetratricopeptide repeat domain 383 489 IPR011990 GO:0005515
Pste1g02220 490 SUPERFAMILY Protein kinase-like (PK-like) 37 316 IPR011009 -
Pste1g02220 490 FunFam probable serine/threonine-protein kinase At4g35230 29 133 - -
Pste1g02220 490 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 18 489 IPR045845 GO:0004672|GO:0009742
Pste1g02220 490 Gene3D Transferase(Phosphotransferase) domain 1 135 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02220 Pste-Chr1 7400842 7405014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02220 43 321 Glycoside Hydrolase AT3G07070 34.084 1.08e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pste1g02220 PK_Tyr_Ser-Thr 7.7e-28 CL0016