Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02215 TGTTGACTCACGCTCTATCTGCTTCAACGTTGCCACTACTCTGAAAGAAAAAAAGAACACTTCTTTTTTTTTCTCTCTCCTACTGTTCACTCTGCTGTGTGCCAAAACCAAAACCACTCACAAGGTGCCACTAATCTGTCAGGTTTCTTCATTATTTCACAGCATCTGTGACTTCAGTTGGGTTGAACTAATGGAATCTTGGAGCTATGTCCCTGAAGAGAAAGGCTATTTGTTTTCAGATGAAATGGATTTTTCACTTGATGCTTTCATGAGAACTAGAAAAGCATTGGTGGAATGGGAAAACAAATCCAACTTTGAGAGAGATGGATTTAATTCAGATAGAGAGGTAGTTAAAAGCATGGAATTTGTTGACTTGGGATTCCCTGACTTGTTGCAAAAGTCTTTTCATGGAAACCAGCCTCTAGAGACATCTAGCTATGAATTAGATAGTAATAATTCTAGTAAAAGAGGGAATTCCTCCACACGTGTCATTACTTTGGATTCTTCTTTGGGGGAAGAAGAATCTGATTCAAAGCATTTAACTTCACTAGTTGAATCTAAGTCTCATGATTCTTCACTGATTGATCTGAAGCTAGGGAGATTAGCAGATTGTAAAGGTTCAAGCAGTGATAAAGTTGCTAAAGAAGACTTCACTTTAACATCTATACAGCCAACCACTCTTTCAAAGAGAGCTCGCACTTCCAACTTACCTCAGGCTCCTGTATGTCAAGTTTATGGTTGTAACATGGATCTTAGCTCCTCAAAAGATTACCACAAAAGGCATAAAGTTTGTGATGCTCACTCCAAAACAGCTAAAGTTATTGTAAATGGCATTGAACAGAGGTTTTGTCAGCAGTGCAGCAGGTTCCATTTGCTAGCTGAGTTTGATGATGGTAAGCGCAGTTGTCGCAGGCGTCTAGCAGGACACAATGAACGCCGGAGGAAACCTCAATTTGATTACATGACTGGTAAACAACACAAGATTTTTCAGTCATATCAAGGTACTAAGATTCTCGAGTCTTCATTACAGAACAAACCCCAGTTTCCCTTTCAAGACATATTTCAAAGTGGCATCCTTTTCCCTGTAAAGCATTCTCAAATCTCTCAGAGTGGTCGTGTCAAACTAGAAGAGGATTCAATTTACAGTTCCCAACTTGCTGCACCTGTCACACTTGATCAGGAATCTTCAAGCTGTGCTCTCTCTCTTCTGTCAGATCAGTCACAGTATCCATCACGCCATGCAGCAGGGAATCCATTAGCCAGTCCCCAAGTCTTTCATGGCATCCACATGCCAGACAGAGACAGCCAAGTTTCTGAATCACCTTTGAGGATGAGCTCTACAGGTAAATATGCTCCAAATGAGTCCTTTCCAGGTAATTCAACCTCTAAAGAAGTTGCCAAGAATAGATCTGCCACTCTTTCTCATGCCGGTCATGCTCTTCAAGTCCATGGTGGAGATAATATGTGCCAACCATCAGACTTGTTTGACTTCAAACATTGTCTTTCCTCGGAACACGGAGCCACTGTTGATCTTTTCCAATTGTCCTCACATCTTCAGAGGGTGGAGCAGCAAAGAAATTCTGTTTTGGTAAAGTGGGAAAATGATGATTACTGTTTCCCAACTGTGTGA 1630 0.4104 MESWSYVPEEKGYLFSDEMDFSLDAFMRTRKALVEWENKSNFERDGFNSDREVVKSMEFVDLGFPDLLQKSFHGNQPLETSSYELDSNNSSKRGNSSTRVITLDSSLGEEESDSKHLTSLVESKSHDSSLIDLKLGRLADCKGSSSDKVAKEDFTLTSIQPTTLSKRARTSNLPQAPVCQVYGCNMDLSSSKDYHKRHKVCDAHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLAGHNERRRKPQFDYMTGKQHKIFQSYQGTKILESSLQNKPQFPFQDIFQSGILFPVKHSQISQSGRVKLEEDSIYSSQLAAPVTLDQESSSCALSLLSDQSQYPSRHAAGNPLASPQVFHGIHMPDRDSQVSESPLRMSSTGKYAPNESFPGNSTSKEVAKNRSATLSHAGHALQVHGGDNMCQPSDLFDFKHCLSSEHGATVDLFQLSSHLQRVEQQRNSVLVKWENDDYCFPTV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02215 479 ProSiteProfiles Zinc finger SBP-type profile. 176 253 IPR004333 GO:0003677
Pste1g02215 479 MobiDBLite consensus disorder prediction 375 400 - -
Pste1g02215 479 Pfam SBP domain 179 252 IPR004333 GO:0003677
Pste1g02215 479 MobiDBLite consensus disorder prediction 79 105 - -
Pste1g02215 479 MobiDBLite consensus disorder prediction 79 114 - -
Pste1g02215 479 SUPERFAMILY SBT domain 177 258 IPR036893 GO:0003677|GO:0005634
Pste1g02215 479 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 115 428 IPR044817 GO:0003677
Pste1g02215 479 MobiDBLite consensus disorder prediction 370 400 - -
Pste1g02215 479 FunFam Squamosa promoter-binding-like protein 14 170 240 - -
Pste1g02215 479 Gene3D - 170 240 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02215 Pste-Chr1 7374674 7380080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02215 1 477 SBP-box Gene Family AT1G69170 34.578 2.46e-64 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pste1g02215 SBP 1e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02215 1 7374674 7380080 Pste1g02215 1 7374674 7380080 ECH