Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02204 AGCAACTGAGTTTCCAATTCTGAGACTGCAGGGGTAATTTTGATATTGTAAAAGATAAAGACAAAATGGAGTTAAATCTAAATGGTATTACGATGTCGCTTTGCCTCAGCACCTAACTTCCCGGGGACAGTGACGGGATTTAAAGGAACGCCGGCGTGACCACAACGCCAATTGTTGGTTCCTTCCCACACTCACTCACTAATCACTCCGACTGTGGGCATGGCTCCTGAAGAGAGGCAACAACCTCTGTTAGCGGCGTATGGCGAAGACCAAGAAGAGAGCGCATACAATTCCTCAGAGAAGGTGGTGGTGGTCGGAATCGAGGAGGAGGAGGGGGACGTGGAGGCGGCGCCGTTCTCATGGCGGAAGCTGTGGCTGTTCACGGGGCCGGGGTTTCTGATGAGCATCGCGTTCCTGGATCCCGGGAACCTGGAGGGGGATCTTCAGTCGGGTGCCATTGCTGGGTACTCGCTCTTGTGGCTCCTCATGTGGGCCACGGTTATGGGCCTTATTATCCAGCTTCTCTCGGCTCGGCTCGGCGTCGCCACTGGTAGACACTTAGCCGAACTTTGCAGGGAAGAGTATCCTACCTGGGCTAGGATTATCCTGTGGTTGATGACTGAGGTCGCTCTTATTGGCTCTGACATACAAGAGGTTATTGGCAGCGCTATTGCTATCAGGATTCTCAGTAACGGCGTCGTTCCACTCTGGGCTGGGGTCATCGTTACAGCTTTAGATTGTTTCATTTTTCTCTTTCTTGAGAACTACGGTATTTTGGTTCCTAAACTTAGCTCCAGAACTATACAGAAAGCAGTTGGAGTTGTGGGTTGCATAATTATGCCTCACAATGTGTTCTTGCATTCTGCACTTGTTCAATCTAGGAAGATTGATCCCGGCAAGAAAGGCCGTGTTCAGGAAGCTCTTAATTACTACTCTATTGAGTCCTCCCTTGCCCTTGTAGTGTCCTTTATCATTAATTTATTTGTCACAACTGTGTTTGCTAAGGGCTTTTATGGCACTGAAATAGCAAATAGCATTGGTCTTGTAAATGCAGGGCAGTACCTTCAGGAAAAGTATGGGGGAGGATTATTCCCAATCCTGTATATATGGGGTATTGGGTTATTAGCAGCTGGCCAGAGTAGCACAATTACTGGTACATATGCTGGACAGTTTATCATGGGGGGTTTTCTGAATTTAAGGTTGAAAAAGTGGATAAGAGCATTGATTACACGAAGTTTCGCAATCATCCCAACCATGATAGTTGCTCTTATATTTGACACTTCAGAGCAATCATTAGATGTTCTGAATGAATGGCTCAATGTTCTCCAATCAGTTCAAATCCCATTTGCACTCATTCCCTTGCTTTGCTTGGTGTCCAAAGAACAGATAATGGGAAGTTTCAGAATAGGCCCTGTCCTCAAGATTATTTCCTGGCTTGTGGCTGCTCTGGTGATAGTGATAAACGGCTATCTATTACTGGAATTCTTCTCCTCTGAAGTGAATGGAGCAGTATTTACCGCCATAGTGTGTGTATTAACAGCTGCATATGTTGCATTTGTACTTTACCTTATTTCATGGGCCATCACCTATACACCGTGGCAAAGTTTAACCCGATCAAAGACAGTAGCTAGCACAGAGAATTAAGCAGTCAATTCTAATTCCTAAAACCATGGAGTAGGAAATGCTTTGCCGCTGAAGGCTTTTCCTCGATTCTTTTAGGCATACTCTTGCTTGTTATTTGTAAAAGGACTTGCAATTTGATGCAGGGGGCAGTGGTACCTTGTTGGTTATCATACTTCAACAAAACAATTGAGAGTTGATGTATCTGTATTTCTGTCAAAGTTAGATGTATAATGCAGCTGAAAGCATGCCTTGGATATTGAGATAATGTAGTTGAGACACCTTTTACAACTATGACGTTCAAACTAATGGTTTCCATCATTGTTCTCTCTTGCTCGCCCTATACTAGCTTTTTGGGATTTCTTTTAGGTTGTCG 1996 0.4479 MAPEERQQPLLAAYGEDQEESAYNSSEKVVVVGIEEEEGDVEAAPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATVMGLIIQLLSARLGVATGRHLAELCREEYPTWARIILWLMTEVALIGSDIQEVIGSAIAIRILSNGVVPLWAGVIVTALDCFIFLFLENYGILVPKLSSRTIQKAVGVVGCIIMPHNVFLHSALVQSRKIDPGKKGRVQEALNYYSIESSLALVVSFIINLFVTTVFAKGFYGTEIANSIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWIRALITRSFAIIPTMIVALIFDTSEQSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFRIGPVLKIISWLVAALVIVINGYLLLEFFSSEVNGAVFTAIVCVLTAAYVAFVLYLISWAITYTPWQSLTRSKTVASTEN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02204 474 PRINTS Natural resistance-associated macrophage protein signature 160 179 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste1g02204 474 PRINTS Natural resistance-associated macrophage protein signature 130 156 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste1g02204 474 NCBIfam Nramp family divalent metal transporter 56 182 - -
Pste1g02204 474 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 184 452 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste1g02204 474 Hamap Divalent metal cation transporter MntH [mntH]. 37 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste1g02204 474 Pfam Natural resistance-associated macrophage protein 184 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02204 Pste-Chr1 7304011 7307868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02204 35 460 Inorganic Solute Cotransporters AT2G23150 75.480 0.0 719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02204 1 7304011 7307868 Pste1g02204 1 7304011 7307868 ECH
Pste1g02204 1 7304011 7307868 Pste7g01002 7 9203875 9207691 PCT