Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02199 TGGTGAAAAGATGCGAGACAGGTGATGATGGTCTATCTAACGGAGTTTGCGTGTAGGTGAAACCAGCTCCAGCGCAGTGCGTAAAGGCAGAGAGAGAAGAGAGTGAGTTACATAATGAAGAGTGACGAAGCCATTTCGCCATTATCACTCTCGCACCAAAAGCGATGAAGCTCTAGGTCAGTCAGTTCCTTCAGTTTCACCTTTCGAATCCAATCCTTCTCTCTCCCCTTCTTCATCTCATTCCATTTTTAAAATCAATTATCACTGTTGATCTTCGCACTTCCTGTTTTTCTCGCCTTATTCCGTACATATCCCTCTGGCGTTCCGATCTCTGAAGTCGCGAGATTCTTCTGCCTCGATTGCGCACTTCATGTGATTCTGCTTCTCTCTCCAACCAAGTTTACATTTTAGGAGTAGCTGAATCATATGAGGCGAGTGGTCCTTTGTTAATTACTTCAACTTCTGTTGACAAATCTTCCTTGATCAATTTGTTAAGATTGAAGAATAGATTTGTGTATATACTAATATTGCAGATTACTTGTCTGGAAGAAAGGATTCAAAATGAGTTGGAACCCACACATGGAGGTCCATTACAATAGCATTAGCTATCCGTATAATACAGCAGGAAGCTTTATTGAATATTTTGAAGGTCTCACCTATGAACATGTCAACTTCATTTTTTCTGGTGCATCACATGCTCAGGAGAGTTCATACCCTTCAAATTCAAGCTTTTACAAGTTTGGACTATCTGAACCTGAAAATACTTCATACTATCGTTACAGTCATGGTTATGAGGTAAATAATCACGAACCACTGGTGGATGAATACAGGAGACCTTCAGAGAACTCATTGGCAATCAATGAACAACAGACAGCAGCTGTAAGCACAGAATGGGTCCAAGGTGGAAATACTGACACACGAGACAATTCTATTGAATGTCCTCGAAGACTTCATAGTAATTCAAATGATTATCAGGTCATTTGGCAAGACAATATTGATCCTGACAACATGACCTATGAGGAACTACTTGAATTAGGCGAAGCTGTTGGAACTCAAAGCCGTGGTCTTACCCAAGAACAGATCTCCTCACTACCAGTGTCAAAGTACAAATGTGGGTTCTTCTTGAGGAAGAAGTCACGGGATGAGAGATGTGTGATTTGCCAGATGGAATATAAAAGAGGGGACAAACGTATCACCTTGCCATGTAAACATGTTTATCATGCAGGTTGTGCTAACAGGCTTGCCCGATATGTTACACGGAAGTGTTTGCCGACAAGTCAAAACACAAACACAAATAATCTTGAGCGGACAAGTATCTGCCTGCATATGTTTCTGTTTCACCTAGAGTGTGGGGCTCTACCATAGAAATACATTTTTCTTGTCTTTTCCCTTTTCTTAGTGAGGTAAGCCCTTGGTTTTAGCAAGAATACAGAGAGAATCTTAGCTTTATAAAGAATATGGACACGAAACAATTATCATGATTGTACTGGAGAGGCTTGATTACGGTTTGTTTTCATAATATTTAATACAGTGTGCTATGATTTCGCGTAATTATTACCTTGTGCTGCTGATAGAGTGTTGTTGG 1585 0.4038 MSWNPHMEVHYNSISYPYNTAGSFIEYFEGLTYEHVNFIFSGASHAQESSYPSNSSFYKFGLSEPENTSYYRYSHGYEVNNHEPLVDEYRRPSENSLAINEQQTAAVSTEWVQGGNTDTRDNSIECPRRLHSNSNDYQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTQEQISSLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLPCKHVYHAGCANRLARYVTRKCLPTSQNTNTNNLERTSICLHMFLFHLECGALP 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02199 267 Pfam RING-like zinc finger 197 223 IPR001841 -
Pste1g02199 267 SUPERFAMILY RING/U-box 191 230 - -
Pste1g02199 267 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 4 224 IPR033276 GO:0004842|GO:0016567|GO:0046621
Pste1g02199 267 FunFam E3 ubiquitin ligase BIG BROTHER 159 241 - -
Pste1g02199 267 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 159 243 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02199 Pste-Chr1 7277695 7282621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02199 5 226 C3H Transcription Factor Family AT3G63530 41.667 7.93e-53 170