Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02194 ATGACCAATTCCTACACCTCCAATGACCTTCAATTTTGGTTGGACCTCAATTCACCATGTCTTCTCTCTTCTCCTTCTTTATCATCATCATCATCACCTTCCAACAATCCACCATTCTATTTTCCTTCCAATTATCATAATAACGATACAAGTCGCATATCTTCTACTCAATTCCAATCCTCTCCTCCTCAAGCAAAAGCCCTTCCCCTCCTTCATCTAAGGCATGAAGAAGAGGAAGAAGTAGAAGAAGAAGATCTTGAATCTTCATTCAGTGCCATGGAAGTGGACAAGAAAAAGAAAGAACTCAGTACATCCTCTAGCTATTTGGAAGAAGAGGATACTGTGGCCTTACAGTTAGGGCTTCCAAGCACGAGTGCATCTGCTGATGTAGCTTCAAACCTACACTCAACAGAGATTTCAGACAAAGAAGAAAAAGTAATCACTGATGCTTCGGGGCTTCTGTCAAATAGAATTAACAGAGGACAATATTGGATCCCTACTTCTGCTCAGATTCTGATTGGTCCAACACAGTTCGCATGCCCCCTTTGTTTCAAGACGTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGTTCTCAATATAGGAAGGGACCAGAGTCTCTTAGGGGAACTCAACCAACAGCTATGCTAAGACTCCCTTGCTATTGCTGTGCAGCGGGATGCAAGAACAACATCGACCATCCGAGAGCAAAACCACTCAAAGATTTCAGAACCCTTCAAACGCATTACAAGAGAAAGCATGGGACAAAGCCTTTCGTATGCAGAAAATGTTGCAAATCATTTGCTGTGAGGGGTGATTGGAGAACTCATGAAAAGAATTGTGGGAAACGATGGTATTGCTCTTGTGGGTCTGATTTTAAGCACAAAAGATCTCTCAAGGATCATATCAAGGCATTTGGATATGGGCACACGGCTGATGGAAATGACTGCAACCTTGACCAAGATGATGATCAGGTAGGCTCTGAAATTGAACAAGAAAATTAATGCTATCTTCCACTCGCAATTCATATCATGTCAACTAT 1052 0.4211 MTNSYTSNDLQFWLDLNSPCLLSSPSLSSSSSPSNNPPFYFPSNYHNNDTSRISSTQFQSSPPQAKALPLLHLRHEEEEEVEEEDLESSFSAMEVDKKKKELSTSSSYLEEEDTVALQLGLPSTSASADVASNLHSTEISDKEEKVITDASGLLSNRINRGQYWIPTSAQILIGPTQFACPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAAGCKNNIDHPRAKPLKDFRTLQTHYKRKHGTKPFVCRKCCKSFAVRGDWRTHEKNCGKRWYCSCGSDFKHKRSLKDHIKAFGYGHTADGNDCNLDQDDDQVGSEIEQEN 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02194 337 PANTHER ZINC FINGER PROTEIN WIP2 31 336 IPR043584 GO:0003700|GO:0010468
Pste1g02194 337 Gene3D Classic Zinc Finger 220 309 - -
Pste1g02194 337 ProSitePatterns Zinc finger C2H2 type domain signature. 180 200 IPR013087 -
Pste1g02194 337 ProSiteProfiles Zinc finger C2H2 type domain profile. 178 205 IPR013087 -
Pste1g02194 337 MobiDBLite consensus disorder prediction 23 64 - -
Pste1g02194 337 FunFam Zinc finger protein WIP2 231 313 - -
Pste1g02194 337 SUPERFAMILY beta-beta-alpha zinc fingers 244 282 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02194 Pste-Chr1 7249620 7251980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02194 114 335 C2H2 Transcription Factor Family AT3G57670 65.476 1.73e-115 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste1g02194 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01421 3 8816210 8824531 Pste1g02194 1 7249620 7251980 PCT