Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02189 AACGGAGTTCGTTGGTACAGAGAGAGAGAAGCAACAAAAGGCCCTTTTAAATACCAAACACTGACACACACAAACGACGCATCCTTCTCTCTCTTCTCGGCTTTGATTTCTCTCTCCTCCTCCTCGATCCCAAATCCACTAGGGATTCATTTTCGATGCGATTCTGAGCTTATTAGATCCACGACAAGGTTTTGTTTCCCAGATTCTTTTGTAAAAAATTCTTCCTCTGCCCAACAGATACCAATCATGGTTGGTTGCTTGGTTTGCTCTGGAGTGGCTGTTTTTTTTTATTATGAAATTAGTGATGACGTGATCTTAGATGAAAGTTGGAAAAAGATGGACCATGACAAGACTGGGTGCCAAGCTCCTCCTGAAGGTCCTATATTGTGCATCAACAACTGTGGATTTTTTGGAAGTGCAGCTACCATGAACATGTGTTCTAAATGCCACAAAGACATGTTGCTGAAACAGGAGCAGGCCAAGCTTGCAGCATCATCCATTGGGAATATTATGAATGGATCATCAAGCAGCACTGAAAATGAACCTGTTGTTGCTGCTAATGTTGATATCCCAGTTATTCCTATAGAGCCTAAAACTGTTTCTGTGCAACCGTTATTTGGTTCAGGTTCAGAGGGGAGTGGTGAGGCAAAGCCGAAGGATGGTCCAAAACGTTGCAGCAGCTGCAACAAGCGAGTTGGTTTGACTGGGTTTAATTGTCGATGTGGCGACCTTTTTTGTGCTGTACATCGCTACTCAGACAAGCATAATTGCCCATTTGATTACCGCACTGCTGCTCGGGATGCCATAGCTAAAGCAAACCCAGTTGTCAAGGCTGAGAAGCTTGATAAGATCTGAGATTTGAAGTTGAAGTTTCATGCCTTGATATGAAGTTATGCACAATTTCATCATGAAATGACCCGAGTTTCCTTCACATTTTATTGGTGTTCTTATTATATTGTTATATGTGGTGGGTGACTTGGAGTTATAGGACATCTCTGCAATTTGAAGGACTCTTTCATGTGATTGGCGAAAATATATATGTTGGCCACAGTGTTTAAGTTTTTAAATCTGCTGGTTTGGTGAAAGTTGGTGTTGTTTGCTTTGTAATGCATCTATCCTGTATCAGAATGGTATGTGCAATTTAAAGATGGTTTCAAGAGCATCCATGGACATGTGGTAGATTGTAATTATTGTGGGTTATCTATGAATTATTTTCCATAGCAGTATCTTGTTAACATTAGGTTTTTCATATGCTAAATTTTTTCAGAAATTG 1273 0.4038 NGVRWYREREATKGPFKYQTLTHTNDASFSLFSALISLSSSSIPNPLGIHFRCDSELIRSTTRFCFPDSFVKNSSSAQQIPIMVGCLVCSGVAVFFYYEISDDVILDESWKKMDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMLLKQEQAKLAASSIGNIMNGSSSSTENEPVVAANVDIPVIPIEPKTVSVQPLFGSGSEGSGEAKPKDGPKRCSSCNKRVGLTGFNCRCGDLFCAVHRYSDKHNCPFDYRTAARDAIAKANPVVKAEKLDKI 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02189 284 ProSiteProfiles Zinc finger AN1-type profile. 219 265 IPR000058 GO:0008270
Pste1g02189 284 SUPERFAMILY AN1-like Zinc finger 214 279 IPR035896 -
Pste1g02189 284 SMART A20_3 127 151 IPR002653 GO:0003677|GO:0008270
Pste1g02189 284 Pfam A20-like zinc finger 128 151 IPR002653 GO:0003677|GO:0008270
Pste1g02189 284 PANTHER AN1-TYPE ZINC FINGER PROTEIN 125 284 - -
Pste1g02189 284 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 129 165 - -
Pste1g02189 284 Pfam AN1-like Zinc finger 225 261 IPR000058 GO:0008270
Pste1g02189 284 MobiDBLite consensus disorder prediction 204 225 - -
Pste1g02189 284 Gene3D - 113 181 - -
Pste1g02189 284 SMART AN1_Zf_4 225 262 IPR000058 GO:0008270
Pste1g02189 284 Gene3D - 208 280 IPR035896 -
Pste1g02189 284 FunFam Zinc finger AN1-type containing 6 201 280 - -
Pste1g02189 284 ProSiteProfiles Zinc finger A20-type profile. 124 158 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02189 Pste-Chr1 7202784 7205599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02189 120 284 C2H2 Transcription Factor Family AT3G52800 43.030 4.24e-36 125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02189 1 7202784 7205599 Pste1g02189 1 7202784 7205599 ECH