Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02185 ATGGATTCGGTGGAGGTGGAGGTGGAGAAGCTGAGAGCCCTGAAGGTGCTTGGAAAGGGAGCGATGGGGACGGTGTTCCTGGTGGAGGACAGGACGAAAAGCACAAAAGCTCCATTCGCCCTGAAAGTGGTGGACAAAACATGCGTGCACGCAAAACTGGACGCGGAACGGCGTGCGAGATGGGAAATACAAGTACTCTCAAAGCTCTCACACCCCTTCCTCCCTTCCCTGATGGGAACATTCGAGTCCCCACAGTTATTAGCCTGGGCCCTCCCCTACTGCCCCGGTGGAGACCTCAACGTCCTCCGCTACCACCAAACAGACCGCTCCTTCTCCCCAGCGGTCATACGCTTCTACGTCGCCGAAATCCTCTGCGCCCTCGACCACCTCCATTCCATGGGCATCGCATACCGCGACCTGAAACCCGAAAATGTCCTCGTCCAACACAACGGCCACGTCACCCTCACCGATTTCGACCTCTCCCGCAAACTCACCCTCAGACCCGTTCCCCCCCTCTCCTTGCCCCCTCCCGACCCTCGCCGTAAACACCGCCGCAACTTCTCCCGCTGGATCCCGCTCCTCCCTCCCGATGGTCTCAAGAAGGCCAAGTCCGCACGTGTCAGCCCTGTCAGTCGCCGAAGACCCAGTTTCTCCAACGGCCAACGCTCTAACTCCTTCGTCGGCACCGAGGAATACGTCTCTCCTGAGGTCGTCCGCGGCGACGGCCACGAGTTCTCCGTTGACTGGTGGGCCCTTGGAATACTCATGTACGAAATGCTCTATGGTACCACGCCTTTTAAGGGCAAGAATCGCAAGGAAACCTTCCGCAACGTTCTCACCAAGCCGCCTGAGTTCGTCGGCCAACGAACCCCCTTGACCGACCTTATTGAGAAGTTGTTGCAGAAGGATCCCACCAAGCGGTTAGGTTACTCGCGCGGCGCCGCTCAGATCAAGGAGCACGACTTCTTTCGAGGGGTTCAGTGGGATCTTCTCACGGAAGTCTTCCGCCCGCCCTTCATTCCTTCCAGGGACTGCCCCTCCTTTCAGTTCTCCGACCATAATTCTGGCTTCGATATTACCGAATACTTCCAGAACTTGAAATCATCCCCTTCGTTGCCTCCTTCGCCGTCTTCCTCTCCCTCTCCCTCTCTCTCTCCGTCGCCGTCCTCCAGGTTTAAGAAGAATCTCTCTCTAACAGAATTCTAA 1206 0.5721 MDSVEVEVEKLRALKVLGKGAMGTVFLVEDRTKSTKAPFALKVVDKTCVHAKLDAERRARWEIQVLSKLSHPFLPSLMGTFESPQLLAWALPYCPGGDLNVLRYHQTDRSFSPAVIRFYVAEILCALDHLHSMGIAYRDLKPENVLVQHNGHVTLTDFDLSRKLTLRPVPPLSLPPPDPRRKHRRNFSRWIPLLPPDGLKKAKSARVSPVSRRRPSFSNGQRSNSFVGTEEYVSPEVVRGDGHEFSVDWWALGILMYEMLYGTTPFKGKNRKETFRNVLTKPPEFVGQRTPLTDLIEKLLQKDPTKRLGYSRGAAQIKEHDFFRGVQWDLLTEVFRPPFIPSRDCPSFQFSDHNSGFDITEYFQNLKSSPSLPPSPSSSPSPSLSPSPSSRFKKNLSLTEF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02185 401 SMART serkin_6 11 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02185 401 PANTHER FLIPPASE KINASE 1-RELATED 6 345 - -
Pste1g02185 401 FunFam Serine/threonine-protein kinase OXI1 98 166 - -
Pste1g02185 401 MobiDBLite consensus disorder prediction 366 401 - -
Pste1g02185 401 SUPERFAMILY Protein kinase-like (PK-like) 9 390 IPR011009 -
Pste1g02185 401 ProSitePatterns Protein kinases ATP-binding region signature. 17 42 IPR017441 GO:0005524
Pste1g02185 401 MobiDBLite consensus disorder prediction 202 223 - -
Pste1g02185 401 Gene3D Transferase(Phosphotransferase) domain 1 220 342 - -
Pste1g02185 401 FunFam Serine/threonine-protein kinase OXI1 221 342 - -
Pste1g02185 401 FunFam Serine/threonine-protein kinase UCNL 11 97 - -
Pste1g02185 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Pste1g02185 401 MobiDBLite consensus disorder prediction 384 401 - -
Pste1g02185 401 Pfam Protein kinase domain 14 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02185 401 Pfam Protein kinase domain 218 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02185 401 ProSiteProfiles Protein kinase domain profile. 11 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02185 401 Gene3D Transferase(Phosphotransferase) domain 1 98 164 - -
Pste1g02185 401 Gene3D Phosphorylase Kinase; domain 1 12 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02185 Pste-Chr1 7139076 7140281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02185 6 380 AGC Kinase Gene Family AT3G20830 60.513 1.88e-157 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pste1g02185 Pkinase 5.8e-33 CL0016