Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02182 ATGCTCAACTCGAGGCAATCCTTGTACATCTCTTTCTCTTCTTCTCCTTCTTCATTGTTTTGTATCATTCTCCTCCAAGTTACACTTTTCTATGGCCTTGCTTTCTCAGCCAACCATGAAGCCTCAACACTCTTCTCTTGGCTCCATAGTTCTTCTGCATCACCACCCTCTCCTTCTTTCTCTAACTGGAACATCCTTCACCCTAATCCATGCAACTGGACATCCATAACGTGCTCCTCACTAGGCTTTGTCACTGAAATCACCATACAATCCATCCCTCTTGAGCTTCCTATACCTTCCAACCTCTCTTCGTTTCACTCTCTTCAAAAGCTTGTGATTTCTGATGCCAATCTCACTGGAACCATCCCTTCAGACATTGGTGATTGTTCTTCTCTCACTGTTATTGACCTCAGCTCTAACAACCTTGTAGGCTCTATTCCTGCAACCATTGGCAAGCTTCCAAACCTTCAGAACTTGTCTTTGAACTCTAACCAGCTTATTGGAAAAATCCCAGTCGAGTTAAGCAATTGCATTGGCCTGAAAAATCTACTCCTTTTTGATAATCAGATAAGTGGGACTCTTCCACCTGAGCTGGGGAAGTTGTTACAACTTGAGTCACTAAGAGTAGGAGGGAACAAAGATATAGTTGGGAAGATTCCTGAAGAGCTTGGAGAATGCAGCAATTTGACAGTGTTGGGGCTGGCTGATACCAGAATATCTGGTTCTTTGCCTGCTTCTTTGGGTAGGCTTAACAAACTTCAGACACTGTCAATTTATACTACCATGCTGTCTGGTGAAATTCCACCAGAGTTAGGTAACTGTTCTGAACTTGTTGACTTATTCCTATATGAAAATAGCCTATCAGGGTCTATTCCATCTGAGCTTGGTAAGCTCAAGAAGCTGGAACAGTTGTTTTTGTGGCAAAATGGTCTTGTAGGGGCCATCCCAGAAGAGATTGGTAACTGTACAAGCTTGAGAAAAATTGATTTCTCTTTGAATTCTGTATCTGGTACTATTCCTGTGTCTTTGGGGGGTCTTTTGGAGCTTGAAGAGTTTATGATTAGTGACAACAATGTGTCTGGTTCAATCCCTTCTAGTCTTTCAAATGCTAAAAATCTTCAACAGTTGCAAGTTGACACAAACCAGCTCTCAGGCTTGATTCCACCAGAGCTTGGCCAGTTGTCAAACCTCATCGTGTTCTTTGCTTGGCAGAACCAACTTGAGGGAAGCATTCCCTCCACTTTGGGGAACTGTAGTAACCTTCAAGCACTGGACTTGTCGCGCAATGCACTCACTGGTAGTATTCCTGTTGGCCTGTTCCAGCTCCAGAACCTCACAAAACTTCTTCTGATTTCAAATGACATATCAGGTTTCATACCAAATGAAATAGGCAGTTGCAGCTCTCTTATAAGGTTGAGGCTTGGAAACAATAGGATTACTGGTAGCATTCCCAAGACAGTAGGAAACCTCAAGAGCTTGAACTTTTTAGACCTCTCCGGGAACCGCCTCTCCAGGCCAGTACCTGATGAGATTGGAAGCTGCTCTGAACTGCAAATGATAGACTTCAGCAGCAACAACTTGGAAGGCCCTCTGCCTAATTCTTTGTCTTCACTATCAGCAGTTCAGGTATTGGATGCATCTTCCAACAAGTTTTCAGGTCCTCTACCAGCCAGTTTGGGCCGGCTTGTTTCTATGAGTAAGCTTATCCTAAGCAATAACTTATTTTCTGGACCTATTCCTGCATCACTGGGCCTATGTTCAAATCTCCAACTGCTTGATCTTAGTAGAAATAACCTCAGTGGAAGCATACCGGCTGAGCTCGGCCACATTGAGACTCTAGAAATCGCTCTTAATCTTAGTTGCAATTCATTCAGTGGAATAATCCCAGCTCAGATATCTGCTCTTAACAAGCTTTCCATATTGGACCTCTCACACAACCAGTTGGAAGGAGATTTGCAACCTCTTGCAGATTTAGACAATCTTGTCTCCCTGAATGTTTCTTTCAACAAATTTTCTGGCTGTCTTCCAGATAATAAGCTTTTCAGGCAGTTGGCATCAAAAGATTTCACTGCAAATCAAGGGCTCTCATGCTTTATGAAAGATTCTGGCAAGACTGGTATGGCACTGAATGGAAATGAAGTAAGGAAATCACAAAGGCTTAAGGTAGCCATTGGACTGCTGATAGCCTTAACAGTAATAATGATTGTTATGGGGATAACTGCTGTGATCAAAGCAAGAAGAACCATTAGAGATGATGATTCAGAATTGGGGGACTCATGGCCATGGCAATTCATACCATTCCAGAAGCTAAGCTTTTCAGTGGAACAAATACTGAGATGTTTAGTTGAAAGAAATATTATTGGAAAGGGATGTTCTGGTGTTGTTTATAGAGCTGAAATGGATACTGGTGAAGTCATTGCTGTGAAGAAATTGTGGCCTACAACAATTGATGAAGAAGAAGCATTTAAGGAAGAAAAAAGTGGAGTTCGTGACTCGTTCTCAGCTGAAGTCAAGGCCCTTGGCTCAATCCGTCATAAGAACATTGTCAGATTCTTGGGGTGCTGTTGGAACAGAAAAACAAGATTGCTTATTTTCGATTATATGCCGAATGGAAGTTTGAGTAGTCTACTTCACGAGAGGACTGGAAATTCTCTTGAATGGGAACTCAGGTACAGAATCTTGCTAGGTGCTGCAGAAGGCCTTGCATATCTACATCATGATTGTGTCCCTCCTATAGTCCACAGAGATATTAAAGCCAATAACATCCTCATTGGCCTTGAATTTGAACCTTACATTGCTGACTTTGGCTTGGCTAAGCTTGTTGATGATGGCGATTTTGGTCGTTCTTCCAATACAGTTGCTGGTTCCTATGGATATATTGCTCCAGAATATGGCTACATGATGAAGATCACAGAGAAGAGTGATGTTTATAGCTATGGTGTTGTTCTATTAGAAGTCTTGACAGGTAAGCAACCGATTGATCCAACCATACCAGATGGTCTGCATGTTGTTGATTGGGTGAGACAGAAAAAGGGTCTTGAAGTACTTGATTCTAGCTTACTCTCTAGACCAGAATCAGAAATAGAGGAAATGATGCAGGCATTGGGAATTGCTTTATTGTGTGTGAATTCATCTCCTGATGAAAGGCCAACAATGAGAGATATTGCGGCAATGCTCAAGGAGATAAAGCATGAAAGGGAGGAGTATGCAAAATTTGATGTGCTTCTAAAAGGGTCTCCTGCAAATGGTGCATGTGGGAATAAAACCTTTGGTGGAGTTGTGCCAACTTCTTCATCAGTACCAACCATGCAAACTTTGAAAACAAAAAGCAGCAACTCAAGCTTCTCTGTCTCTTCACTGCTTCATTCATCTTCAAGTGTCAAGATGGGTTCAAAATGA 3399 0.4213 MLNSRQSLYISFSSSPSSLFCIILLQVTLFYGLAFSANHEASTLFSWLHSSSASPPSPSFSNWNILHPNPCNWTSITCSSLGFVTEITIQSIPLELPIPSNLSSFHSLQKLVISDANLTGTIPSDIGDCSSLTVIDLSSNNLVGSIPATIGKLPNLQNLSLNSNQLIGKIPVELSNCIGLKNLLLFDNQISGTLPPELGKLLQLESLRVGGNKDIVGKIPEELGECSNLTVLGLADTRISGSLPASLGRLNKLQTLSIYTTMLSGEIPPELGNCSELVDLFLYENSLSGSIPSELGKLKKLEQLFLWQNGLVGAIPEEIGNCTSLRKIDFSLNSVSGTIPVSLGGLLELEEFMISDNNVSGSIPSSLSNAKNLQQLQVDTNQLSGLIPPELGQLSNLIVFFAWQNQLEGSIPSTLGNCSNLQALDLSRNALTGSIPVGLFQLQNLTKLLLISNDISGFIPNEIGSCSSLIRLRLGNNRITGSIPKTVGNLKSLNFLDLSGNRLSRPVPDEIGSCSELQMIDFSSNNLEGPLPNSLSSLSAVQVLDASSNKFSGPLPASLGRLVSMSKLILSNNLFSGPIPASLGLCSNLQLLDLSRNNLSGSIPAELGHIETLEIALNLSCNSFSGIIPAQISALNKLSILDLSHNQLEGDLQPLADLDNLVSLNVSFNKFSGCLPDNKLFRQLASKDFTANQGLSCFMKDSGKTGMALNGNEVRKSQRLKVAIGLLIALTVIMIVMGITAVIKARRTIRDDDSELGDSWPWQFIPFQKLSFSVEQILRCLVERNIIGKGCSGVVYRAEMDTGEVIAVKKLWPTTIDEEEAFKEEKSGVRDSFSAEVKALGSIRHKNIVRFLGCCWNRKTRLLIFDYMPNGSLSSLLHERTGNSLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVLLEVLTGKQPIDPTIPDGLHVVDWVRQKKGLEVLDSSLLSRPESEIEEMMQALGIALLCVNSSPDERPTMRDIAAMLKEIKHEREEYAKFDVLLKGSPANGACGNKTFGGVVPTSSSVPTMQTLKTKSSNSSFSVSSLLHSSSSVKMGSK 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02182 1132 Pfam Protein tyrosine and serine/threonine kinase 784 1058 IPR001245 GO:0004672|GO:0006468
Pste1g02182 1132 SUPERFAMILY Protein kinase-like (PK-like) 759 1060 IPR011009 -
Pste1g02182 1132 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 437 531 - -
Pste1g02182 1132 Gene3D Phosphorylase Kinase; domain 1 766 867 - -
Pste1g02182 1132 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 868 1077 - -
Pste1g02182 1132 Gene3D Ribonuclease Inhibitor 40 152 IPR032675 -
Pste1g02182 1132 Gene3D Ribonuclease Inhibitor 153 240 IPR032675 -
Pste1g02182 1132 Gene3D Ribonuclease Inhibitor 436 530 IPR032675 -
Pste1g02182 1132 Gene3D Ribonuclease Inhibitor 531 615 IPR032675 -
Pste1g02182 1132 FunFam Putative LRR receptor-like serine/threonine-protein kinase 616 701 - -
Pste1g02182 1132 Gene3D Transferase(Phosphotransferase) domain 1 868 1077 - -
Pste1g02182 1132 FunFam Nuclear pore complex protein NUP107 37 190 - -
Pste1g02182 1132 FunFam LRR receptor-like serine/threonine-protein kinase 536 611 - -
Pste1g02182 1132 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 764 867 - -
Pste1g02182 1132 ProSiteProfiles Leucine-rich repeat profile. 637 659 IPR001611 GO:0005515
Pste1g02182 1132 SUPERFAMILY RNI-like 111 502 - -
Pste1g02182 1132 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 325 1059 - -
Pste1g02182 1132 SMART LRR_typ_2 562 586 IPR003591 -
Pste1g02182 1132 SMART LRR_typ_2 658 683 IPR003591 -
Pste1g02182 1132 SMART LRR_typ_2 490 514 IPR003591 -
Pste1g02182 1132 SMART LRR_typ_2 153 177 IPR003591 -
Pste1g02182 1132 SMART LRR_typ_2 635 654 IPR003591 -
Pste1g02182 1132 SMART LRR_typ_2 418 442 IPR003591 -
Pste1g02182 1132 SMART LRR_typ_2 298 322 IPR003591 -
Pste1g02182 1132 SMART LRR_typ_2 587 610 IPR003591 -
Pste1g02182 1132 ProSiteProfiles Protein kinase domain profile. 781 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02182 1132 ProSitePatterns Serine/Threonine protein kinases active-site signature. 912 924 IPR008271 GO:0004672|GO:0006468
Pste1g02182 1132 ProSitePatterns Protein kinases ATP-binding region signature. 787 810 IPR017441 GO:0005524
Pste1g02182 1132 SMART serkin_6 781 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02182 1132 Gene3D Ribonuclease Inhibitor 616 702 IPR032675 -
Pste1g02182 1132 Gene3D Ribonuclease Inhibitor 338 435 IPR032675 -
Pste1g02182 1132 Gene3D Ribonuclease Inhibitor 241 337 IPR032675 -
Pste1g02182 1132 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 213 436 - -
Pste1g02182 1132 SUPERFAMILY L domain-like 387 696 - -
Pste1g02182 1132 Pfam Leucine rich repeat N-terminal domain 37 79 IPR013210 -
Pste1g02182 1132 PRINTS Leucine-rich repeat signature 589 602 - -
Pste1g02182 1132 PRINTS Leucine-rich repeat signature 635 648 - -
Pste1g02182 1132 Pfam Leucine rich repeat 107 166 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02182 Pste-Chr1 7099360 7103038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02182 35 1078 Receptor kinase-like Gene Family AT5G56040 48.536 0.0 974
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste1g02182 PK_Tyr_Ser-Thr 1.4e-43 CL0016