Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02178 GCAAAGCCAAGCGAGAATGAACGCTGCGTCGCCGGAATTGGTTGTTGCATCGTGGACTTGGACGGAACTCAGAGACAGAAGAGGTGCACCACGAAAAGGAGATTGACATATTGGGCCAAATACGTCAGATGGATTGACATGTTGGCTTCTTTCACGTGCATGCACTTGAACACGTTAGACCATCTAGCATATTCGAAATGGAGAATCTCCAACACACGAGACCATTTGACATGTTTCATGGTAAAAATATTGGATGGGTTTGAAAACATCACCACTTATTCTAGTCTCTTTAAGGGTTTTAACTTGAGTGCTTTCACGACCACGATGACTGCGAGCAACAAGAAGCTTTTGTCAGATGATGAGATCCCTTCATGGGTGAGTGAACGACAGAGGAGGCTTCTCCAGGCTGCAGACCCCAAACCCAATGTTGTTGTGGCCCAGGATGGCAGTAGACAGGTGAAGACTAACCATGAGGCTCTTATGATGGTATCCAAGAAGAACAAACAACCCTTCGTCATTTACATCAGAGAGTGTTATGTTAGCTTGAACAAGCACTTGACCTATGTCACCATTATCGGAGATGGTCCCACCAAAACGAGAATCACTGGCAACAAGAACTACGTGGATGACATCCAAACCTACAACACAACCATT 654 0.4541 AKPSENERCVAGIGCCIVDLDGTQRQKRCTTKRRLTYWAKYVRWIDMLASFTCMHLNTLDHLAYSKWRISNTRDHLTCFMVKILDGFENITTYSSLFKGFNLSAFTTTMTASNKKLLSDDEIPSWVSERQRRLLQAADPKPNVVVAQDGSRQVKTNHEALMMVSKKNKQPFVIYIRECYVSLNKHLTYVTIIGDGPTKTRITGNKNYVDDIQTYNTTI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02178 218 Gene3D - 140 218 IPR012334 -
Pste1g02178 218 PANTHER PECTINESTERASE 71 216 - -
Pste1g02178 218 Pfam Pectinesterase 142 217 IPR000070 GO:0030599|GO:0042545
Pste1g02178 218 SUPERFAMILY Pectin lyase-like 139 216 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02178 Pste-Chr1 7048824 7053560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02178 52 216 Carbohydrate Esterase AT5G49180 43.103 3.88e-29 112