Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02163 CTAAGATACTTTACTTTTAAATATCTCTACCGTCAAATATCTATCACTTTTTCCCCTGAGTCCTCTCCCCTCCGCCGCCGCAGCAATGTCCACCACCACCGCATCCGCCGGCGACTCTCCCTCTTGGCGCTTTCATACGCCCACCCTGGACCGGGAGTCCGCGGTGCTGCTCCACTCCATTTCGAAGCATGGCGGCTACGCGTACGTCAGCATGGCGGCACTGGCAGCCGGCGGCGACATTCGCGCGGCGGAGGCAGCTCGTGAGATGGCGTGGGAGCAGCTTCACTCCGGGCCCTGGCACTCCGTCTTGCCGGTCTGGCGCGACGCCTACTCCATGGCTTGCCTCCACGTGGCCCGGCACCACTACGGCAACGGCGAGTTCAGAGAGGCGCTTAGGGTTTTGGATTTGGGCATCATCATGGGAGGGACGCTCCTCCGAAAGGATTTGGACTCCGCCGTCGACAAAGTGTCCGAACAAACCAGGAACACCGTTAGGGTTTCTGATTTTGGTAACTCCGACCACCTACTCGTTGATCGCGAATTTGATGTGGCAGAGGTGCTCCAACTTTTACCTGTGAAGTCTCTTTCTTCTAAGCTTGTGGTGAAGAAATCAGGAGTATCGTTGGAGAAATTCCTGAAGGATCATTACCTGTCTGGCTGCCCAGTTATAATCAGTGATTGTATGGCTCACTGGCCAGCCAAGACCAAATGGAACGATGAAGATTACTTGTTGAGAGTTGCTGGTGACCGCACAGTTCCTGTTGAGGTTGGCAAAAACTATTTATGTGCTGAGTGGAAGCAAGAGCTAATTACATTTTCAGAGTTTATTCAGCGGATTAAGTCCAATGGCTGTTCTCCTGGTGGTCCTACATATCTTGCTCAGCATCCATTATTTGATCAGATAAATGAACTTCGGAAAGATATTTTTATTCCTGACTATTGTTTTGCTGGTGGAGGGGAGCTACGTTCTCTCAATGCTTGGTTTGGTCCAGCAGGAACAGTAACACCATTACACCATGATCCACATCATAACATACTTGCTCAGGTTGTTGGAAAAAAATACATTAGGCTTTACTCATCATCTTTGTCTGAGGAACTTTTCCCCCACTCTGGTACCATGCTAAGCAATTCCAGCCAGGTTGATTTAGATGAGATAGATCAAAGGAAATTTCCCAAGGTGCAAGAGTTGGAATTTGTAGACTGTATTTTAGAGGAAGGCGAAATGTTATATATCCCGCCAAAATGGTGGCACTATGTGCGGTCTTTGACTACCAGTTTTTCGGTTAGCTTTTGGTGGAGTGAGGGTGAAAGTTCTGACGCATCTTGATGTTTACATTTTCATTCTTTTTCTTAACGGAGAACTGAGCGTGTTCTAAGCAGCGTTTCTAGCTAATATCTATGTAACAGGTCATTTTACATCTCAGTGACACTATAATTCTCGTGCATAAACATCATCATTTTTGGTATATTACTCATCATAAAAACAGCTTTGTCATTTGAATCAGAAAATTTTATGCCCTT 1521 0.4714 MSTTTASAGDSPSWRFHTPTLDRESAVLLHSISKHGGYAYVSMAALAAGGDIRAAEAAREMAWEQLHSGPWHSVLPVWRDAYSMACLHVARHHYGNGEFREALRVLDLGIIMGGTLLRKDLDSAVDKVSEQTRNTVRVSDFGNSDHLLVDREFDVAEVLQLLPVKSLSSKLVVKKSGVSLEKFLKDHYLSGCPVIISDCMAHWPAKTKWNDEDYLLRVAGDRTVPVEVGKNYLCAEWKQELITFSEFIQRIKSNGCSPGGPTYLAQHPLFDQINELRKDIFIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYSSSLSEELFPHSGTMLSNSSQVDLDEIDQRKFPKVQELEFVDCILEEGEMLYIPPKWWHYVRSLTTSFSVSFWWSEGESSDAS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02163 413 SUPERFAMILY Clavaminate synthase-like 176 405 - -
Pste1g02163 413 Gene3D Cupin 172 405 - -
Pste1g02163 413 Pfam Cupin-like domain 182 406 IPR041667 -
Pste1g02163 413 FunFam lysine-specific demethylase JMJ30 171 404 - -
Pste1g02163 413 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 80 408 - -
Pste1g02163 413 ProSiteProfiles JmjC domain profile. 271 413 IPR003347 -
Pste1g02163 413 SMART cupin_9 262 412 IPR003347 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02163 166 404 Acyl Lipid Metabolism Gene Families AT3G45880 23.986 1.14e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pste1g02163 Cupin_8 1e-46 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02163 1 6961012 6964966 Pste1g02163 1 6961012 6964966 ECH