Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02156 ATGGGTATGGCATGGAACAGTTATGTGTGTCTTCTCCTAGTTGGTGTTACAATCACCCAAGCTATGGAAGTTTCTTCTTTAAATAGGACCAGTTTTCCCTCTGGTTTCATCTTTGGCACTGCCTCTTCAGCCTATCAGTATGAAGGTGCTGCATTTGAAGGAAACAAAGGACCAAGTATATGGGATACCATGACTCATAAATATTCAGAGAAAATATTGGATAGAAGCAATGGAGATGTAGCAGTTGACCAATATCATCGCCATAAGGAAGATGTAGGGATCATGAAGTATATGAATACGGATGCATACAGATTGTCCATCTCTTGGTCAAGGATATTGCCAAAAGGAAAAATAAGCACCGGTATAAATCAAGAAGGAATCAAATACTACAACAACCTCATCAATGAGCTACTAGCAAATGATCTTCTGCCATTTGTTACTCTTTTCCATTGGGATCTACCCCAAGCCTTACAAGATGACTACGGTGGCTTCTTAAGCCCTCATGTTATAAATGATTTCCAAGACTACGCTGACCTTTGCTTCAAGGAATTTGGAGATAGAGTCAAACATTGGATTACTTTGAATGAGCCATGGAGTTATAGCATAAGCTTAAATTGTCATTGGTTTATTCCGTTCTCAAATGACACATTGGATCATCAAGCTGCCCAACGAGCTCTTGATTTCATGTTTGGATGGTTTATGCAGCCACTTACAACAGGAAATTATCCAGAAATCATGCAGTCTTTGTTGGGAAGCCGATTACCAAACTTCACTGAAGAGCAATCCAAGCTACTTATTGGCTCGTTCGATTTTATTGGACTCAATTACTACACCACTAATTATGCTGCCCATATATCCCATCCAATTAATAACACACACAATAATAGCTATTACCAAGATACTCATGTCAATTTTACAAGCATAAGCTTAAATTGTCATTGGTTTATTCCGTTCTCAAATGACACATTGGATCATCAAGCTGCCCAACGAGCTCTTGATTTCATGTTTGGATGGTTTATGCAGCCACTTACAACAGGAAATTATCCAGAAATCATGCAGTCTTTGTTGGGAAGCCGATTACCAAACTTCACTGAAGAGCAATCCAAGCTACTTATTGGCTCGTTCGATTTTATTGGACTCAATTACTACACCACTAATTATGCTGCCCATATATCCCATCCAATTAATAACACACACAATAATAGCTATTACCAAGATACTCATGTCAATTTTACAACTGAACGTAACGGGACACCCATTGGAGCAAGGGCTGCTTCATCATGGCTTTATGTTTATCCAAGGGGACTTCGAGAGCTATTGTTGTACATAAAGATGAAGTATAACAACCCTATAATTTACATAACAGAAAATGGAATGGACGAGGCAAATGATCCGACGCTAACACTTGAAGAGGCACTTATGGATACGTATAGAATTGACTACTTCTATCGCCATCTTTATTATATTTTAATTGCAATGAAAGATGGAGTGAAAGTACAAGGATATTTTGCATGGTCGCTTCTGGACAACTTCGAATGGGTTGCCGGCTACACTTCCCGTTTTGGAATTAACTTTGTTGATTACAATGATAACTTGAAAAGACACCAAAAACTCTCTGCCCATTGGTTTCGGAATTTTCTTCAAAAACATTAG 1653 0.3848 MGMAWNSYVCLLLVGVTITQAMEVSSLNRTSFPSGFIFGTASSAYQYEGAAFEGNKGPSIWDTMTHKYSEKILDRSNGDVAVDQYHRHKEDVGIMKYMNTDAYRLSISWSRILPKGKISTGINQEGIKYYNNLINELLANDLLPFVTLFHWDLPQALQDDYGGFLSPHVINDFQDYADLCFKEFGDRVKHWITLNEPWSYSISLNCHWFIPFSNDTLDHQAAQRALDFMFGWFMQPLTTGNYPEIMQSLLGSRLPNFTEEQSKLLIGSFDFIGLNYYTTNYAAHISHPINNTHNNSYYQDTHVNFTSISLNCHWFIPFSNDTLDHQAAQRALDFMFGWFMQPLTTGNYPEIMQSLLGSRLPNFTEEQSKLLIGSFDFIGLNYYTTNYAAHISHPINNTHNNSYYQDTHVNFTTERNGTPIGARAASSWLYVYPRGLRELLLYIKMKYNNPIIYITENGMDEANDPTLTLEEALMDTYRIDYFYRHLYYILIAMKDGVKVQGYFAWSLLDNFEWVAGYTSRFGINFVDYNDNLKRHQKLSAHWFRNFLQKH 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02156 550 Pfam Glycosyl hydrolase family 1 289 549 IPR001360 GO:0004553|GO:0005975
Pste1g02156 550 Pfam Glycosyl hydrolase family 1 30 200 IPR001360 GO:0004553|GO:0005975
Pste1g02156 550 FunFam Beta-glucosidase 12 17 203 - -
Pste1g02156 550 SUPERFAMILY (Trans)glycosidases 305 548 IPR017853 -
Pste1g02156 550 Gene3D Glycosidases 202 302 - -
Pste1g02156 550 FunFam Beta-glucosidase 12 305 549 - -
Pste1g02156 550 PRINTS Glycosyl hydrolase family 1 signature 452 460 IPR001360 GO:0004553|GO:0005975
Pste1g02156 550 PRINTS Glycosyl hydrolase family 1 signature 268 282 IPR001360 GO:0004553|GO:0005975
Pste1g02156 550 PRINTS Glycosyl hydrolase family 1 signature 475 486 IPR001360 GO:0004553|GO:0005975
Pste1g02156 550 PRINTS Glycosyl hydrolase family 1 signature 496 513 IPR001360 GO:0004553|GO:0005975
Pste1g02156 550 PRINTS Glycosyl hydrolase family 1 signature 520 532 IPR001360 GO:0004553|GO:0005975
Pste1g02156 550 Gene3D Glycosidases 14 201 - -
Pste1g02156 550 Gene3D Glycosidases 303 549 - -
Pste1g02156 550 PANTHER GLYCOSYL HYDROLASE 298 549 IPR001360 GO:0004553|GO:0005975
Pste1g02156 550 SUPERFAMILY (Trans)glycosidases 24 294 IPR017853 -
Pste1g02156 550 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 36 50 IPR033132 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02156 Pste-Chr1 6912343 6917973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02156 12 550 Glycoside Hydrolase AT5G44640 43.431 2.75e-160 464