Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02141 AAGGTTAGTGTAGAGGGTGTGGTGTGGCTTCCAACTTTTTTATTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTATCGAAATGGCATGTTAATATAAACCATTCCAAAAACAAAGACAGAAGAACACGCATTCTATTCTTCCGATTCCTTCGCAATACCTCTGACCTAGATTTTGTCCCCTTCTCGAGGATGGAATCGGAGGATGATATGCACGACGCCAACGACATGGAGTCCATCGACGACGATTACTACAGTGGCGAGACAGAGGACGCTCCTCTCGATTACTACAGCGATTACGATGACGACGCCGATGATTACTTCCACGACGCCCACAGGATTGACTCTCGTCGCCCTGAGCAAAATTTTACCATCTTGAAGGAATCCGATATCCGACTAAGACAGGAAGATGACATCACTCGAGTAGCAACGGTTCTTTCCATGTCAAGGGTTCTTGCAAGCATACTACTACGACACTACAATTGGAGCGTCAGTAGAGTGCATGATGCATGGTTTGCTGATGAAGAACGAGTACGAAAAGCAGTTGGCTTGTTGGAGAAGCCGATTGTTCAGCATCCTAATACTAGAGAGACCAGCTCACTTGTGGTATCTGTTTTGAGAATTATCCTCGTGCTAGGATTGAAATGGCTTCCTGTGGGCATCCCTACTGTATCTCTTGCTGGGAAGCTAGGCTATATCAGCACATCCATTAATGATGGTCCTGGATGTTTGATGCTGAGATGTCCTGATCCCACTTGTGGTGCTGCTGTTGGTCAAGATATGATTAATCTTTCAGCATCCAATGAAGATAAGCAGAAATATGCACGTTACCTTCTTAGATCTTATATTGAAGACAATAAGAAGTCCAAATGGTGTCCTGCTCCAGGCTGTGAATATGCAGTTACTTTTGATGCTGGTAGTACTGGAAATTATGATGTTTCTTGCCTCTGTTCATATAGCTTTTGTTGGAATTGCACTGAGGAGGCTCATCGTCCGGTGGACTGTGGCACCGTGGCAAAGTGGATTTTGAAGAACAGTGCAGAGTCTGAAAACATGAATTGGATACTTGCAAACTCAAAGCCATGTCCCAAGTGCAAGCGGCCAATTGAAAAAAATCAAGGGTGCATGCACATGACGTGCACTCCACCCTGTAAATTTGAATTTTGCTGGCTGTGCCTTGGTGTATGGTCAGACCATGGTGAAAGAACTGGTGGTTTTTATGCTTGCAATCGTTATGAAGCAGCTAAACAAGAAGGAGTGTATGACGATACTGAAAGAAGAAGGGAAATGGCAAAGAATTCACTGGAAAGATACACACATTATTATGAGCGGTGGGCCAGTAATCAATCTAATATGTTATGTGGTTATATTATATATTTTGATATAACAGTGAAATATACATTTTGTTGTCTACAGTCAAGGCAAAAAGCTCTTGCAGATTTACAGCAGATGCAAACTGTTCATATTGAGAAGCTTAGTGACACGCAGTGTCAACCTGAGTCACAGCTTAAGTTCATAACTGAGGCCTGGCTACAAATAGTTGAGTGCAGAAGAGTGCTGAAGTGGACATACGCATATGGGTTCTATTTACCGGAGCATGAGCATGCAAAAAAGCAGTTCTTTGAGTACTTACAAGGCGAAGCAGAATCTGGTCTGGAGAGACTTCATCAATGTGCTGAAAAGGAACTACAGCCATTCCTATGCGCTGATAATCCATGTAAAGAATTCAATGACTTTCGTACAAAGCTAGCTGGATTGACTAGTGTGACTAAAAACTACTTTGAGAATTTAGTACGGGCATTAGAGAATGGATTATCTGATGTGGACAGTAATGGAGCTGCCTTCAGCAGAGCAACGAGCTCAAAAAATGCTGCTGGGAGCAGTAAGGGGAGAGCTGGAAGAGTAAAGGGAGCATTTCGAACCAGCATGTCCAGCAGAATGAGTGATGATAATCATTGGAGTTGCGAGCATTGCACCTATGCAAACGTCAAATCTGCCACCACATGCCAAATGTGCTTTCAACCACGGCGGTGAGACTTCGTCCATTTGAAACACTTGTCTTCTGTCCAATGCCTTTGCATAATTGCATCTAAAGCTGAGTTGAAGTCGTTCCTCTGTATTTTGTGAGGCTCTTCTAATATAACGGGATGAAAGGGGAGTAAAGCTTGGAACTGATGGAAGAAAGTTTGCCCTCCATGCAGTCCTATTCGATACAACCCAATTTGATGTATATAGTGTTTTATCTTGTTTACGTATGAGGTTTGCTACTACAGGCATTTGTAACTGAATATCATAACACAACAGATGCTAAAGATGACACAAATGTGCTCGTTTGTGACCACTCTTTCAGTTGGTCTCTTGGCAGCTTGCAAGAGATACCTAGGGTTAGTCATGTATAATAAGTTCAATGTTTCATTACATTCAAGAAATGATAAGAGACTGCAATACATATTATACTGGATCA 2489 0.4267 MESEDDMHDANDMESIDDDYYSGETEDAPLDYYSDYDDDADDYFHDAHRIDSRRPEQNFTILKESDIRLRQEDDITRVATVLSMSRVLASILLRHYNWSVSRVHDAWFADEERVRKAVGLLEKPIVQHPNTRETSSLVVSVLRIILVLGLKWLPVGIPTVSLAGKLGYISTSINDGPGCLMLRCPDPTCGAAVGQDMINLSASNEDKQKYARYLLRSYIEDNKKSKWCPAPGCEYAVTFDAGSTGNYDVSCLCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHMTCTPPCKFEFCWLCLGVWSDHGERTGGFYACNRYEAAKQEGVYDDTERRREMAKNSLERYTHYYERWASNQSNMLCGYIIYFDITVKYTFCCLQSRQKALADLQQMQTVHIEKLSDTQCQPESQLKFITEAWLQIVECRRVLKWTYAYGFYLPEHEHAKKQFFEYLQGEAESGLERLHQCAEKELQPFLCADNPCKEFNDFRTKLAGLTSVTKNYFENLVRALENGLSDVDSNGAAFSRATSSKNAAGSSKGRAGRVKGAFRTSMSSRMSDDNHWSCEHCTYANVKSATTCQMCFQPRR 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02141 613 SUPERFAMILY Ran binding protein zinc finger-like 585 612 IPR036443 -
Pste1g02141 613 ProSiteProfiles Zinc finger RanBP2 type profile. 585 613 IPR001876 -
Pste1g02141 613 ProSiteProfiles TRIAD supradomain profile. 131 349 IPR044066 -
Pste1g02141 613 Pfam IBR domain, a half RING-finger domain 208 271 IPR002867 GO:0008270
Pste1g02141 613 Pfam IBR domain, a half RING-finger domain 288 335 IPR002867 GO:0008270
Pste1g02141 613 MobiDBLite consensus disorder prediction 1 26 - -
Pste1g02141 613 SMART ibrneu5 208 271 IPR002867 GO:0008270
Pste1g02141 613 SMART ibrneu5 275 345 IPR002867 GO:0008270
Pste1g02141 613 SUPERFAMILY RING/U-box 167 220 - -
Pste1g02141 613 SMART zf_4 587 611 IPR001876 -
Pste1g02141 613 SUPERFAMILY RING/U-box 290 338 - -
Pste1g02141 613 CDD Rcat_RBR_ARI7-like 294 348 - -
Pste1g02141 613 ProSitePatterns Zinc finger RanBP2-type signature. 589 608 IPR001876 -
Pste1g02141 613 Gene3D - 267 544 - -
Pste1g02141 613 CDD BRcat_RBR_ANKIB1 215 280 - -
Pste1g02141 613 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 167 459 IPR031127 GO:0004842|GO:0016567
Pste1g02141 613 SUPERFAMILY RING/U-box 209 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02141 Pste-Chr1 6824993 6832714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02141 17 612 ARIADNE family AT1G65430 65.404 0.0 779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03451 3 27132902 27147219 Pste1g02141 1 6824993 6832714 PCT