Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02139 ATGGAGATTGGAAGAGAGGAAGGAAGAATCCATGGGAAGCTGCATATCAACGCAAGGCGTGAAGGCAAGAGCACGCAGCAAGAGGGCGAACAAGGCATGGACACCGAAGGTGCAGGCGGCGAGGAGGACAAGCGTGACGGCGGGGCGGAGGTCGAGCGTGACGTCGTTGCGTCCGATGAACGTGGTGTCGGATCCTTGTCCGGGGAACATATTCGACAAGTACCAGTTCGGGAAGGAGCTTGGGAGGGAGAGTTCGGGGTGACGGTGCGCGTGGTCGACCTTGAGAGTGGTGAGGCCTTTGCATGCAAGAAGATTGCCAAGACCAAGCTTCGAACCGAGATTGACGTGCAAGACGTTCGTAGGGAGGTGCAGATTATGCGCCACTTGCCTCGCCACCCCAACATTGTTGCTTTCAAGGAGGCTTATGAAGACAAAGACGCTGTTTACCTTGTCATGGAGCTTTGTGAAGGTGGCGAACTCTTCGATAGGATTGTTGCTAAGGGTCATTACACCGAGCGTGCTGCTTCTAACGTTGCCAAAACCATTCTTGAAGTCTGCAAGATGTGTCATGACCACGGCGTCATACACAGAGACTTAAAACCTGAAAACTTCTTATTTGCTGATTCAAACGAGACTGCTCCTTTGAAGTCTATTGATTTTGGCCTTTCCACCTTCTACGTGCAAGGCGAAAGATTCAGTGAAATTGTTGGAAGTCCCTATTACATGGCTCCCGAGGTTTTAAGACGTAACTACGGACCAGAGATTGATGTCTGGAGCACAGGCGTGATTCTATATATTTTACTGTGTGGGGTTCCACCCTTTTGGGCAGAATCTGAGGAAGGGATTGCACAAGCCATCATCAAGGGTAAAGTAGATTTCACAAGAGACCCTTGGCCTAAAGTTTCTGATGAAGCAAAACATCTAGTTAAGCGCATGCTTGATCCAAATCCATTCACCCGTATAACAGTTCAAGAAATTCTTGATCATTCCTGGATACAAAATAGGGAGCATGGTCGTACTATTTCTCTTGGAGACCAAGTGAGAATGAGGATCAAGCAATTCTCCTTGATGAACAGATTCAAGAGGAAAGTTCTTAGAGTGGTGGCCGATAACCTGTCAGATGAGCAAGTTGATGTCTTTAAGCAAATGTTCGATATGATGGATAAGGACAAAAATGGAAACTTGTCATTTGATGAGCTCAAAGATGGCCTTTCAATGATTGGACATGCCATTCCTGATCCTGATGTCCAAATGTTAATGGAAGCTGCAGATATTGATGGAAATGGCTCCCTCAATTATGATGAGTTCATAACAATGAGTGTTCATCTGAGAAAGATAGAAAGTGACGAGCATCTCACTGAAGCGTTCCGTTACTTTGACAAAAATCAAAGCGGATATGTTGAGTTTGAGGAGTTGAAAGATGCCTTATCAGATGATGAGTCAGAGGCCAGTGATGACCAAGTGATCAAAGACATTCTAAATGATGTTGACTTGGATAAAGACGGTCGAATCAGTTTTGAGGAGTTTAAGGCAATGATGAAGACAGGAGGAGATTGGAAAATGGCCTCTCGCCAGTACTCAAGAGCATTGCTGAATGCATTGAGCTTCAAGATGTTTAAAGACACATCGAGCAACTCTGTTAAGCGTAACTAA 1653 0.458 MEIGREEGRIHGKLHINARREGKSTQQEGEQGMDTEGAGGEEDKRDGGAEVERDVVASDERGVGSLSGEHIRQVPVREGAWEGEFGVTVRVVDLESGEAFACKKIAKTKLRTEIDVQDVRREVQIMRHLPRHPNIVAFKEAYEDKDAVYLVMELCEGGELFDRIVAKGHYTERAASNVAKTILEVCKMCHDHGVIHRDLKPENFLFADSNETAPLKSIDFGLSTFYVQGERFSEIVGSPYYMAPEVLRRNYGPEIDVWSTGVILYILLCGVPPFWAESEEGIAQAIIKGKVDFTRDPWPKVSDEAKHLVKRMLDPNPFTRITVQEILDHSWIQNREHGRTISLGDQVRMRIKQFSLMNRFKRKVLRVVADNLSDEQVDVFKQMFDMMDKDKNGNLSFDELKDGLSMIGHAIPDPDVQMLMEAADIDGNGSLNYDEFITMSVHLRKIESDEHLTEAFRYFDKNQSGYVEFEELKDALSDDESEASDDQVIKDILNDVDLDKDGRISFEEFKAMMKTGGDWKMASRQYSRALLNALSFKMFKDTSSNSVKRN 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02139 550 FunFam Calcium-dependent protein kinase 7 341 517 - -
Pste1g02139 550 SUPERFAMILY Protein kinase-like (PK-like) 82 333 IPR011009 -
Pste1g02139 550 ProSiteProfiles EF-hand calcium-binding domain profile. 484 519 IPR002048 GO:0005509
Pste1g02139 550 SUPERFAMILY EF-hand 369 519 IPR011992 -
Pste1g02139 550 Pfam Protein kinase domain 82 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02139 550 SMART serkin_6 82 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02139 550 ProSitePatterns EF-hand calcium-binding domain. 497 509 IPR018247 -
Pste1g02139 550 ProSiteProfiles EF-hand calcium-binding domain profile. 447 482 IPR002048 GO:0005509
Pste1g02139 550 ProSitePatterns EF-hand calcium-binding domain. 460 472 IPR018247 -
Pste1g02139 550 ProSiteProfiles EF-hand calcium-binding domain profile. 411 446 IPR002048 GO:0005509
Pste1g02139 550 PANTHER SERINE/THREONINE-PROTEIN KINASE 81 506 - -
Pste1g02139 550 MobiDBLite consensus disorder prediction 37 59 - -
Pste1g02139 550 CDD EFh 380 439 IPR002048 GO:0005509
Pste1g02139 550 Gene3D Phosphorylase Kinase; domain 1 79 159 - -
Pste1g02139 550 Pfam EF-hand domain pair 450 514 IPR002048 GO:0005509
Pste1g02139 550 Pfam EF-hand domain pair 379 439 IPR002048 GO:0005509
Pste1g02139 550 SMART efh_1 488 516 IPR002048 GO:0005509
Pste1g02139 550 SMART efh_1 415 443 IPR002048 GO:0005509
Pste1g02139 550 SMART efh_1 451 479 IPR002048 GO:0005509
Pste1g02139 550 SMART efh_1 379 407 IPR002048 GO:0005509
Pste1g02139 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Pste1g02139 550 FunFam calcium-dependent protein kinase 13 160 340 - -
Pste1g02139 550 ProSitePatterns EF-hand calcium-binding domain. 424 436 IPR018247 -
Pste1g02139 550 MobiDBLite consensus disorder prediction 1 62 - -
Pste1g02139 550 Coils Coil 549 550 - -
Pste1g02139 550 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Pste1g02139 550 MobiDBLite consensus disorder prediction 1 27 - -
Pste1g02139 550 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Pste1g02139 550 CDD EFh 451 514 IPR002048 GO:0005509
Pste1g02139 550 CDD STKc_CAMK 82 331 - -
Pste1g02139 550 Gene3D - 341 516 - -
Pste1g02139 550 Gene3D Transferase(Phosphotransferase) domain 1 160 340 - -
Pste1g02139 550 ProSiteProfiles Protein kinase domain profile. 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02139 550 FunFam Aurora kinase A 77 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02139 Pste-Chr1 6820380 6822998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02139 83 541 EF-hand Containing Proteins AT2G31500 70.716 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste1g02139 Pkinase 3.9e-72 CL0016