Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste1g02131 | CAACTTGATAGGCCCTATAGTAATATACTAATATATTCCACTTATTACCTTCACTCCCTCTCTGCATTTTGTACTCCTCCTTCTCCTTGTGAAACAGCAAATGGCTCAGCTTAAGCTTCTACTTGTCTGGTTATTTTTCTTCTGTCTGTGCCTTTATTGGTGTCCTAGTTCGGCCCAGCTAAGTAGACACCACTATGCAAAAACATGCCCCAATGTCGAAAACATCGTCAGAGAGGCAGTCAAAAAGAAATTTCATCAAACATTTGTCACGGTTCCTGCTACCATTCGTCTCTTCTTCCATGATTGCTTCGTCCAGGGTTGTGATGCTTCGGTTATGGCTGCATCCACGGGAAACAACAAAGCAGAGAAGGATCACCCTGACAATCTTTCACTTGCCGGAGATGGGTTTGACACCGTGATTAAAGCAAAAGCAGCGGTGGATGCAGTCCCCTTGTGCAGGAATAAAGTTTCATGTGCTGATATTCTAGCTATGGCCACCCGTGATGTTATTGCTCTGGCTGGTGGGCCTTTCTATGAGGTTGAATTGGGAAGATTTGATGGGCTCAGATCTAAAGCTTCCGATGTAAACGGGAGGCTGCCTCAGCCTGACTTCAACTTAAACCAGCTCAATTCACTGTTTGCCGCCAACGGTCTCACCCAAACCGATATGATTGCCCTCTCAGGTGCCCACACTGTAGGATTCTCGCATTGCAACAAATTCTCAAGAAGAGTATACAATTTCAAGAGCAAAAGTGGACTGGACCCTACATTGAACGAGAAATACGCAGCAGAACTAAAGTCCATGTGCCCGAGGAATGTGGATCCAAGAATCGCCATTGATATGGACCCAATAACTCCGCGGGGATTCGACCATCAATATTTCAAGAATCTTCAGCAAGGGAAGGGCCTGTTCTCCTCAGACCAAGTCCTCTTCACGGACTCAAGGTCCAAGCCCACAGTAAATGCCTTCGCAAGTAGCAGCAAAATCTTCCATGCCAACTTCGCCGCTGCCATGACCAAGTTGGGCTGAGTTGAGTAAAGAATGCACAGAATGGAAACATTCGAACCGATTGTTCTGTCATTTAATTTACCACACCATATGTTAAGGACGACCTTATCATCAATTCAGTCTCAGGGGAATTCCTTATGTACATTACTTTTCCTTTATTGTTTCAAATAAATAAGTACTAGCTGAAACTATTTAACTATTTCATTTCTCAACCGCCCTCTGTTTTGCACTTTTTGTTCCTTTACATTATCAACTTGTTCCACCACCAATATACTGCTGTATCTTTTCTCAGTCTCAGTTGAGAAAAAAAAGGTCAAAATTATGTTTTTCGACTTCTACCTGCCATAGCTTGCTGCTCAGTTCTCACCTTACCATGGAAGGTACTAAAATTTTGTATTGACCTTCGGATTCTTAATTAACTATGATACAAG | 1440 | 0.4313 | MAQLKLLLVWLFFFCLCLYWCPSSAQLSRHHYAKTCPNVENIVREAVKKKFHQTFVTVPATIRLFFHDCFVQGCDASVMAASTGNNKAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPLCRNKVSCADILAMATRDVIALAGGPFYEVELGRFDGLRSKASDVNGRLPQPDFNLNQLNSLFAANGLTQTDMIALSGAHTVGFSHCNKFSRRVYNFKSKSGLDPTLNEKYAAELKSMCPRNVDPRIAIDMDPITPRGFDHQYFKNLQQGKGLFSSDQVLFTDSRSKPTVNAFASSSKIFHANFAAAMTKLG | 309 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste1g02131 | 309 | PRINTS | Haem peroxidase superfamily signature | 123 | 140 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | PRINTS | Haem peroxidase superfamily signature | 249 | 264 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | PRINTS | Haem peroxidase superfamily signature | 189 | 204 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | PRINTS | Haem peroxidase superfamily signature | 58 | 72 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | PRINTS | Haem peroxidase superfamily signature | 141 | 153 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | Pfam | Peroxidase | 43 | 293 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | SUPERFAMILY | Heme-dependent peroxidases | 26 | 309 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | CDD | secretory_peroxidase | 26 | 309 | IPR033905 | GO:0004601|GO:0042744 | |
| Pste1g02131 | 309 | ProSiteProfiles | Plant heme peroxidase family profile. | 26 | 309 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | Gene3D | - | 31 | 309 | - | - | |
| Pste1g02131 | 309 | FunFam | Peroxidase | 30 | 176 | - | - | |
| Pste1g02131 | 309 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 189 | 199 | IPR019793 | - | |
| Pste1g02131 | 309 | FunFam | Peroxidase | 167 | 308 | - | - | |
| Pste1g02131 | 309 | ProSitePatterns | Peroxidases active site signature. | 58 | 69 | IPR019794 | GO:0004601 | |
| Pste1g02131 | 309 | PANTHER | - | 9 | 309 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | PRINTS | Plant peroxidase signature | 188 | 200 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | PRINTS | Plant peroxidase signature | 141 | 156 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | PRINTS | Plant peroxidase signature | 36 | 55 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | PRINTS | Plant peroxidase signature | 303 | 309 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | PRINTS | Plant peroxidase signature | 60 | 80 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | PRINTS | Plant peroxidase signature | 247 | 262 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | PRINTS | Plant peroxidase signature | 263 | 280 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | PRINTS | Plant peroxidase signature | 101 | 114 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | PRINTS | Plant peroxidase signature | 122 | 132 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Pste1g02131 | 309 | Gene3D | Peroxidase, domain 2 | 167 | 308 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste1g02131 | Pste-Chr1 | 6783354 | 6785220 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste1g02131 | 8 | 309 | Peroxidase | AT3G49960 | 66.776 | 2.20e-150 | 423 |