Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02128 CCCGAGTCCTTTGGATACGGTTGTGCAGTAGACAAATATTTGGTTTGCAGCTAAATGTGAATGTGAATGGGGAGAAGAGAAAGACAAGGAACAACAACGTAAAGGGTTTTGGACTATGAAACTCAAAGTGATGCGTTTCATCGTTCCTTGCGCCCAAACCCTAACCTTATGCATTCATTCTCTCTGATCAGGTGTTTCTGACTGAGATATTCTGATCATGTAATTATTTTTAATCACAAAATCTAGAATTACTTCATGTATCCAAAACGATCAGGCCAAGATGGCCCTGTTTCCAGACAGGTGCGTTCAAGTGATAGGATCAAGACAAGGCCAAACATTTATGGCCGCCAATTCTTGTATTACAACCAAAGTCTTAGGCGCACCAGGAAAAGCAAGATGAAGACAAGGACTGCAGCTTCACAGATTGCTAAGATGTTGCGTCCTGGGAATCGGAAATCACAAGACTCTAATATTAATCATTCTTACTCCCTTAGATCTGGATATATGGGCCTTGAACAGTCTGGCTCTGCCAACCTTCGACGTTCAACGAGGAAGAGAAGGCTTAATGTAAATCTTGAAGACTTTACAGACAGCTCTGGAGCTGAAGATGATGACTTAATGAGACCTACATATCCATCATTGAGAAACCGGATTAAAAATAGTGTCAGACAAGATGGTTTGATGTCTAATAAGCGCAAAAGACCTGCAGAAGCTAAACCAACACCTCGACGTGAAGGTCTACGTCCTCGTCGTTCAAAGGGTGCTGCAATACAACGATTAATTTCAGAATCAGATGATGAGCAAGATCTTTCAGAGGATAAGGTTGAGCAGGATGAAACAGAAAATGGAAATGATGTTGAGGAAAATGATGCAGATGATGGCCAAAATGAGATAGAGGGGGATGCTGAGGGTGAAGATGAGGGTGAGGATGAAGGTGATGACGATGGTGATGACGAAGAGGGTGAAGAAGAGCAGGATGGAAGAAGGCGTTATGATCTTCGAAATCGTTCCGATGTCCGGAGGTTCTCTATGGAGGAAGGGAAGGCCCGACCAAGATCTCCTCGAAGAGTTCTACATCAAGGTATGGGAACTAAGGTCAGCAGGGATGTAAGAAAAGGTGGATCACGAGTTCATAAGCGTCATCGTTTAGCAAGGCCTGAAGATTCTGACGACTCCCTTCTTGTGGATGAGCTGGACCAAGGCCCAGCTATTCCATGGGGGCGAGGTGGCAACAAATCTGGTCCGCCTTGGCTTTTTGGGGGCTTAGACATGCATGGAACAACAGCTTTCGGATTAAATCTTGCTGCATCAGGTTGGGGTCATCAGGGTGATGCTTTGGCTACTCTAACTTCAGGGATTCAAACTGCTGGACCAAGCTCTAAGGGAGGGGCAGATATCCAACCCTTACAGGTGGATGATAGTGTTAGTTTTGATGATATAGGTGGACTCTCTGATTACATTGATGCTCTGAAGGAAATGGTTTTCTTTCCATTATTGTATCCAGATTTTTTTGCAAGTTACCACATAACTCCACCTAGGGGGGTATTGTTATGTGGGCCCCCTGGCACTGGGAAAACATTAATTGCTAGAGCTTTGGCTTGTGCTGCTTCAAAAGCTGGCCAGAAGGTTAGCTTTTACATGCGCAAAGGAGCAGATGTGTTAAGCAAATGGGTTGGTGAGGCTGAAAGACAATTGAAACTACTCTTTGAGGAAGCACAAAGGAATCAACCTTCTATTATCTTCTTTGATGAAATAGATGGACTTGCACCTGTTAGGTCTAGCAAGCAAGAACAAATTCATAATTCCATTGTATCCACCTTGCTTGCTTTGATGGATGGTCTGGACTCTCGTGGGCAAGTTGTTTTAATAGGAGCTACCAACAGGATTGATGCCATTGATGGAGCCTTACGACGCCCTGGTAGATTTGATCGTGAGTTTAACTTTGCTTTGCCTGGTTGTGAGGCACGTGCCGAGATATTAGACATTCATACTCGTAAGTGGAAGCATCCTCCTCCAAATGAGCTAAAAAAGGAACTTGCAACTAGTTGTGTAGGTTACTGTGGGGCTGACCTGAAGGCTCTTTGTACTGAAGCTGCTATCCGTGCATTCCGTCAAAAATATCCACAGGTTTATACTAGTGATGATAAATTTGTTATTGATGTTGATTCCGTCAAGGTAGAAAAGACTCATTTTATTGAAGCTATGTCTACGATTACTCCTGCTGCTCATAGGGGAGCTATTGTGCACTCTAGGCCATTGTCTCTAGTAGTTCAACCATGCCTTCAGAGACATTTAGAGAAAGCCATGAGTATTATATCTGATATTTTCCCTCCAGCTTCAATTGCATCTGAGTTGACCAAACTTTCGATGCTCTCCTACGGTTCTGCAATTCCACTTGTGTATCGGCCTAGGCTCCTGCTTTGTGGTGGTGAAGGTACAGGGCTGGATCATCTTGGCCCTGCGGTTTTACATGAGCTGGAAAAATTCCCTGTACATTCATTAGGACTTCCATCTCTTCTGTCAGATCCCAGTGCAAAAACACCAGAGGAGGCATTGGTGCATATATTTGGTGAAGCTAGAAGAACAACACCATCAATTCTCTATTTACCACAATTTGATGTTTGGTGGGAGACTGCTCATGAACAGCTCAGGGCTGTTCTCCTTACTTTGCTAGAAGAATTACCATCTGACTTGCCTATCTTACTGCTTGGTACATCCTCGGTTGTACTTGCTGAAGTTGAGGAAGTGCCTATTTCCATTTTCCCTCATCACTCAGTTTATCAAGTGAATATGCCATGTACCAAAGATAGGATGCTGTTTTTCAATCTTTTGATAGAAGCAGCTATGTCGATATTGCTGGAAGGAATCAACAAGAAATCACAGGGTACAGGATGCCTACCTGAACTTCCAAAGGCTCCAAAATTTGCTAGTGGTCCAAAAGTATCTGAGCTGAAAGCTAAGGTGGAAGCTGAGCAACATGCACTTCGTAGATTGCGAATGTGTCTTAGAGATGTTTGCAACCGGATACTGTATGACAAACGATTTAATGCCTTCCATTATCCAGTGACAGACGAAGATGCCCCAAATTATCGTTCAATTATACAGAACCCAATGGACATGGCTACCATCCTGCAGCATGTTGATAATGGTGACTATATTGCATGTTCCACATTCTTGCAGGACATCAATCTCATTGTTTCCAATGCAAAGGCGTGTATAGCTTACAATGGAGAGGACTACAATGGTGCTAGGATTGTCAGTAGAGCTTGCGAGCTCCGTGATGCGGTGCATGGTATGCTCTCACAAATGGATCCAGCACTGGTTGCATATTGCGACAAGATTGCTAGCCAAGGTGGCCCAGTTCAGTTGTCAGATGAATTAGGGGATTCTACATTCTCCGCTACTCCTGTTGTGCAATTGGGACAGAGTACCAGAATGAGTGCTCGACTTCGTCATGTTGAACCAGAGGTTAATATGGATCAGAGTTATGAAGTATTGAAGCGAACTAAGAAGATCTCCGAAGTGCATGCAGCAGAAGAGAAATCACAAGAAGATCCTATACCGTCAAAGTCTTCCCAGGAGAATCAGGCAAATGACACAAATTCGGAAATGTTGGAACACATGTCAGTTGAAGGAGATTTGCATGGAACTTGTACAAATAACCTTCCTGATGGCAACAGTCCTGATGATCTTACAATGCTAGATGGTGAATTTTCAAGAGACGTGGAGTCTGTCAAGCAGCTTTTTGTGAAACGTAGTGAAAATTACAGCATTCCACAACTTGAAAGGCTTTACACGAGAATTATGAAGGGCGTGTTTGAAACAAAAAATAAAGGAGTGAATGGGGATCTTAAGTCTTCGGTTGTGGAGTTTTTGTTGAATTTTGTAGAGGATGATGCAAATTTCTAACTGCTGGGTTTTTCCTTCTCCCTCAATGATTTAGAAAAAGGAAAGATTTTTACTGTAAAGTCGGGATTTTTTAATTTAAATGTCATTTGATTGAGTACAAGAGTTCCTTTCATCTCCCTTTCCCTGCTGAGAGCCACAATTGTCCAATGCGATGTAGAGTGGTGTGTAATAATTTATTCTATCTATATTCATAAAGTTGTAATTATAGGATATAGGTTAGATGTCTATGCCAACAGCATGCTTAAATATTAATGGTTCGTAAGAGGGACAACCATTTTTTGTTGCTGTCAACCACTGGCAACTATAAAAAGGTATTTTATGTTCTATGGCATGTCACGCATTTTCTTAAACGC 4262 0.4261 MYPKRSGQDGPVSRQVRSSDRIKTRPNIYGRQFLYYNQSLRRTRKSKMKTRTAASQIAKMLRPGNRKSQDSNINHSYSLRSGYMGLEQSGSANLRRSTRKRRLNVNLEDFTDSSGAEDDDLMRPTYPSLRNRIKNSVRQDGLMSNKRKRPAEAKPTPRREGLRPRRSKGAAIQRLISESDDEQDLSEDKVEQDETENGNDVEENDADDGQNEIEGDAEGEDEGEDEGDDDGDDEEGEEEQDGRRRYDLRNRSDVRRFSMEEGKARPRSPRRVLHQGMGTKVSRDVRKGGSRVHKRHRLARPEDSDDSLLVDELDQGPAIPWGRGGNKSGPPWLFGGLDMHGTTAFGLNLAASGWGHQGDALATLTSGIQTAGPSSKGGADIQPLQVDDSVSFDDIGGLSDYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFALPGCEARAEILDIHTRKWKHPPPNELKKELATSCVGYCGADLKALCTEAAIRAFRQKYPQVYTSDDKFVIDVDSVKVEKTHFIEAMSTITPAAHRGAIVHSRPLSLVVQPCLQRHLEKAMSIISDIFPPASIASELTKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFDVWWETAHEQLRAVLLTLLEELPSDLPILLLGTSSVVLAEVEEVPISIFPHHSVYQVNMPCTKDRMLFFNLLIEAAMSILLEGINKKSQGTGCLPELPKAPKFASGPKVSELKAKVEAEQHALRRLRMCLRDVCNRILYDKRFNAFHYPVTDEDAPNYRSIIQNPMDMATILQHVDNGDYIACSTFLQDINLIVSNAKACIAYNGEDYNGARIVSRACELRDAVHGMLSQMDPALVAYCDKIASQGGPVQLSDELGDSTFSATPVVQLGQSTRMSARLRHVEPEVNMDQSYEVLKRTKKISEVHAAEEKSQEDPIPSKSSQENQANDTNSEMLEHMSVEGDLHGTCTNNLPDGNSPDDLTMLDGEFSRDVESVKQLFVKRSENYSIPQLERLYTRIMKGVFETKNKGVNGDLKSSVVEFLLNFVEDDANF 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02128 1217 Gene3D - 902 1033 IPR036427 GO:0005515
Pste1g02128 1217 PANTHER AAA DOMAIN-CONTAINING 1088 1196 IPR045199 -
Pste1g02128 1217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 714 943 IPR027417 -
Pste1g02128 1217 SMART bromo_6 910 1020 IPR001487 GO:0005515
Pste1g02128 1217 MobiDBLite consensus disorder prediction 1090 1113 - -
Pste1g02128 1217 FunFam ATPase family, AAA domain-containing 2 388 571 - -
Pste1g02128 1217 MobiDBLite consensus disorder prediction 141 167 - -
Pste1g02128 1217 MobiDBLite consensus disorder prediction 1 24 - -
Pste1g02128 1217 MobiDBLite consensus disorder prediction 110 305 - -
Pste1g02128 1217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 389 655 IPR027417 -
Pste1g02128 1217 Pfam AAA+ lid domain 592 629 IPR041569 -
Pste1g02128 1217 Gene3D - 704 828 IPR027417 -
Pste1g02128 1217 Pfam Bromodomain 923 987 IPR001487 GO:0005515
Pste1g02128 1217 Gene3D - 566 651 - -
Pste1g02128 1217 CDD Bromo_AAA 910 1023 - -
Pste1g02128 1217 CDD RecA-like_Yta7-like 394 563 - -
Pste1g02128 1217 ProSitePatterns AAA-protein family signature. 535 553 IPR003960 GO:0005524|GO:0016887
Pste1g02128 1217 SMART AAA_5 426 567 IPR003593 GO:0016887
Pste1g02128 1217 Gene3D - 388 658 IPR027417 -
Pste1g02128 1217 FunFam ATPase family AAA domain-containing protein 902 1033 - -
Pste1g02128 1217 SUPERFAMILY Bromodomain 908 1025 IPR036427 GO:0005515
Pste1g02128 1217 ProSiteProfiles Bromodomain profile. 933 984 IPR001487 GO:0005515
Pste1g02128 1217 Pfam ATPase family associated with various cellular activities (AAA) 430 563 IPR003959 GO:0005524|GO:0016887
Pste1g02128 1217 MobiDBLite consensus disorder prediction 181 237 - -
Pste1g02128 1217 MobiDBLite consensus disorder prediction 238 268 - -
Pste1g02128 1217 FunFam ATPase family AAA domain-containing protein 2B 566 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02128 Pste-Chr1 6763030 6772142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02128 376 630 Calmodulin-binding Proteins AT3G56690 36.680 5.57e-42 166