Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02117 GTGTGGTGCAGATGAATGAAGCGCTACAAAACCATCTCTGACTTCCGTCTCGTATTTTTACTCTCACTATATAAGAGCAAAATCTTGCCACTTCCTTCATTATTCGAAACCGAAAACCCTCTTTGATTGAAACGGAATCGGAGTCAGCTGAGAATGGGGCACAGTTCGAAGAAGAAGAAGCGCGGAGGCGGGAGCGCTCGCCGTAGCAAGGGAAGAGCTCAGTCCAAAGATCACGCTTCTCAGTCCGGCGCCGACGATTACGACCAGCTCTCCGAAGAGATTACCGCATTATGCGCAATTTTCCAAGAAGACTGCAAAATTCTTCCAGGATCGCCTCCGCGAGTAGTTATTAAGCTCAGGCCTTACTCAAAGGACATGGGTTACGAGGACCTAGAAATTTCAGCTTTTCTTGCTGTCAGGTGCTTGCCTGGGTATCCCTTCAAGTGCCCCAAGTTGCAGATTACTCCAGAGAAAGGGTTATCAGAAGTTGATGCGGATAAGCTATTGTCTCTTCTCCATGATCAGGCTTCTTTAAATGCTAGAGAGGGACGAGTAATGATCTATAATTTGGTTGAGGCTGCTCAAGAATTTCTGTCTGGAATTGAGCCAATTGCCAAATCAAATGAATCTAAGCTTTTACACTCAACTGCGGAAAGCAATGAAGAATTTTTTCCAAAGGATATAGCACCTTTAAATAAGAATGGTTCTTTTGTTTATGGGTTTATAGATCTTTTCAGTGGTTGTGGAGAAATGTGGAGTTGGGGTTTTGGAATGGAAGAAATTGCTGGAAAAAGTTTTCTTCCTCCATCTAAGTTAGATGCCCCAAAAACACGTTTCGAGGCTCGGGAGAAGAAATCTGATAGTAAGGAAACACAGTTAATAATACAAGCACTTCCTGCCAAATTAGATGCTGTTGGAGAAGTTAATGAAGACAGCAACACTAGTTTATCTTTGACTTCTTCAAGTAGATCTTCGGAGGAGGATTTCGTAAGGAACGACAATGAAGGTGAGAAAGAGAATTTTATTGTTGACAAGTATATGACAGAAGATAATGAAGGTATTAGTAAAAGTGAATCTTCAGAGTCTGTGTCTTCTGAATCCTTGCCTCATCAGCAACCATCTCAAACAGTTGAAAAGGATCTACTAATGGTTCACATGCTTCGCCTTGTTTGTGCTTCTAAAGGAACATTGGCTGATTGTTTGCCACAAGTGGTAACAGAGCTGTACAATTTAGGGATAATTTCTGACTCAGCACGTGATATGGCATATGAACCACCTCCCATTTTCAACAAAACCTTTGATCAAGTTTTCCAGAAACACCTGGTTGGAAAATCTGCTTCATCCAGAATATCTCAATTTTGGAAACCTGATCTTGGAGGCTCAAACACAGTTTCCCATAGTTCTCGATATTTGAATGATTTTGAGGAGCTACGGCCTCTTGGTCATGGTGGTTTTGGTCATGTTGTATTGTGCAAAAATAAACTTGATGGAAGGCACTATGCAGTGAAGAAAATTCGCCTCAAGGACAAAAGCATGCCCGACCGAATATTAAGGGAAGTGGCTACACTTTCTCGTTTACAACATCAACATGTTGTTCGATATTATCAGGCATGGTTTGAAACTGGAGTTTCTGATTCTTATGGTGATTCTACTTGGGGTTCAAAGAATACAGTAAGCTCTACTTTCAGCCATATAGCTGCAACCTCCAATGAGGTCTTTGGGCATGAGAATCAGCTTGAATCAACTTACCTTTATATACAAATGGAGTACTGTCCCAGGACTCTTCGCCAGATGTTTGAATCATATAACCATTTTGACAAAGGACTGGCTTGGCATTTGTTTCGCCAAATAGTGGAAGGTTTGGCACACATACATGGACAAGGAATAATTCATCGGGACTTGACACCAAATAACATATTCTTTGATGCCCGCAATGATATTAAAATTGGTGATTTTGGTCTTGCCAAGTTCTTGAAGTTGGAGCAGCTGGATCAAGATCTGGGCCATCCCGCTGATGGAACTGGAGTTTCCATTGATGGCACAGGACAAGTAGGGACATATTTCTATACAGCTCCTGAAATTGAGCAAGGATGGCCCAAGATTGATGAAAAGGCTGATATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCACCCATTTGGGACAGCAATGGAGAGACATGTTGTTTTATCTGAACTGAAGCAGAAAGGGGAAGTTCCACCTACTTGGGTTGTGGAGTTTCTAGAACAGGAATCCTTGCTGCGCCGGTTAATGTCTCCAGCTCCTTCTGATCGCCCTTCTGCCACAGAACTTCTGCAAAATGCATTTCCTCAACGAATGGAATCTGAGTTATTGGATGATATCCTTCGAACAATGCAGATATCAGAGGATACAAGCATATATGATAAAGTTTTAAATGCTATCTTTGATGAAGAGATGTTAAGCACAAAACACATTCGTCAGGTTGGTAGATTGGGATCAATTGGAGATAACAGTTCATCCATTCAGTACACAGAATTCGAAACTGAGGTTCGAGATTATGTTGTAGATGTGAACAGGGAAATTTTCAGGCAGCATTGTGCAAAGCACCTAGAAATATCAACAACGCGATTATTAGATGATTGTCCACAGTTTAATAGAAATGCAGTTAAACTTCTAACCCATGGAGGTGACATGCTTGAACTTTGCCATGAGTTGCGTTTACCTTTTGTGAACTGGATTATATCTAACCAGAAATCTTCATTCAAACGATATGAGATATCATGTGTCTTCAGAAGAGCAGTTGGACATTCATCACCAAACCGCTACCTTCAGGGAGATTTTGACATTATTGGTGGTACGTCATCATTGACAGAAGCAGAAGTCATAAAGGCGGTTCTCTGGTTCCGAGACTGGTTCTTGAACTGCCTGGTTCAGAGGTTCATTTGGACTGGATGCCAAACCGGCCGGTCCTGTCCGGTCACAAGGGACATAGTCGCTTGTTTTTTCCATGTAGACTCATGTGATATTCATCTCAACCATGGTGACCTTCTGGATGCAATTTGGTCATGGATTGGAGTCAAGGTAGAACACAGACTTAAAGTAGCAGAGCTGCTTTCAATGATGGGTTCATTGCGACCACAATCCTCAGAAAGGAAATCAAAATGGGTCGTAATAAGGCGACAACTTTTGCAGGAACTGAATTTAGCGGAGGCCATGGTAAATAGGTTACAGACTGTTGGTTTAAGATTCTGTGGATCTGCAGATCATGCACTCCCCCGATTAAGAGGAGCTCTTCCGTCTGATAAACGTGCATTCAAGGCACTTGATGAATTGTCTGAGCTTGTCAGTCTCCTGAGAATTTGGAGGATTGACAAAAATATCTATATCGATGCATTAATGCCACCAACTGAAAGTTATCATAGAGACTTGTTTTTTCAGGTATACTTGAGGAAGGAGAACAGTCCTGGATCTCTCTCGGAAGGTGCCTTGCTGGCTGTTGGTGGTCGATATGACTATTTGCTTCATCAGTCGTGGAGTAGTGACTATGCTGTAGCTGATGACGTCTCATGTTTCACTTGCATGGCTTCAGTTATGGCGAAAGGAAATCCTCCCAATGGTGTGGGGACCAGCCTTGCACTGGAGACAATAATTCAGAATTGTCCTGTAGATTTCAAGCCCAATAGAAATGAGGCCAGCATCAATATTCTTGTCTGTTCTAGAGGAGGAGGTGGTCTTCTGGTGGAGCGCATGGAGCTAGTTGCTGAATTATGGGAAGAGAACTTTAAGGCTGAACTTGTTCCTACCCGTGACCCAAGTTTTACAGAGCAGTATGAGTATGCTAATGAACATGGTATCAAATGTCTTGTCATCATCACAGATACAGATATCTCCTTGACAGATTCTGTTAAGGTTCGACACCTTGAACATAAGAAGGAGAAAAATGTTGAGAGAAAAAACCTAGTCAAGTTTTTATTGGATGCTATGGCAACACAATTTAGAAATCCCTCCATTTGGATTTGATCGGATGTTAGCAGAAGCTCAGCTGTTTCGCCTTCAACATTCATTGATAGAGGGAGTTGTTTCATAGAATAGGAACCAGTTATCAACGTGGAAGCTTCCATTTTTTCACTTTTCAGGGTGTAGAACTGTAGAAGAGAATTATTGTATATCAGTTTTGCAGCTTTATTTGATTGTCATCCCCCTTATGCATAGTTAGTTGTCATGGTGTAAATATGTGTCCATAGTATACGAATGGCTGTAAATCATTACCTGTGAAAAGTAACTATTGGTTTTATTTTTATTTTTTTAAAGGAAAAGTAGCTTTTGATGACCTACTGAAATTATATTCGTATTATTTTGTTTTTCTTTTTTACATTGCGTATTT 4369 0.4125 MGHSSKKKKRGGGSARRSKGRAQSKDHASQSGADDYDQLSEEITALCAIFQEDCKILPGSPPRVVIKLRPYSKDMGYEDLEISAFLAVRCLPGYPFKCPKLQITPEKGLSEVDADKLLSLLHDQASLNAREGRVMIYNLVEAAQEFLSGIEPIAKSNESKLLHSTAESNEEFFPKDIAPLNKNGSFVYGFIDLFSGCGEMWSWGFGMEEIAGKSFLPPSKLDAPKTRFEAREKKSDSKETQLIIQALPAKLDAVGEVNEDSNTSLSLTSSSRSSEEDFVRNDNEGEKENFIVDKYMTEDNEGISKSESSESVSSESLPHQQPSQTVEKDLLMVHMLRLVCASKGTLADCLPQVVTELYNLGIISDSARDMAYEPPPIFNKTFDQVFQKHLVGKSASSRISQFWKPDLGGSNTVSHSSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVSDSYGDSTWGSKNTVSSTFSHIAATSNEVFGHENQLESTYLYIQMEYCPRTLRQMFESYNHFDKGLAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDLGHPADGTGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSELKQKGEVPPTWVVEFLEQESLLRRLMSPAPSDRPSATELLQNAFPQRMESELLDDILRTMQISEDTSIYDKVLNAIFDEEMLSTKHIRQVGRLGSIGDNSSSIQYTEFETEVRDYVVDVNREIFRQHCAKHLEISTTRLLDDCPQFNRNAVKLLTHGGDMLELCHELRLPFVNWIISNQKSSFKRYEISCVFRRAVGHSSPNRYLQGDFDIIGGTSSLTEAEVIKAVLWFRDWFLNCLVQRFIWTGCQTGRSCPVTRDIVACFFHVDSCDIHLNHGDLLDAIWSWIGVKVEHRLKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELNLAEAMVNRLQTVGLRFCGSADHALPRLRGALPSDKRAFKALDELSELVSLLRIWRIDKNIYIDALMPPTESYHRDLFFQVYLRKENSPGSLSEGALLAVGGRYDYLLHQSWSSDYAVADDVSCFTCMASVMAKGNPPNGVGTSLALETIIQNCPVDFKPNRNEASINILVCSRGGGGLLVERMELVAELWEENFKAELVPTRDPSFTEQYEYANEHGIKCLVIITDTDISLTDSVKVRHLEHKKEKNVERKNLVKFLLDAMATQFRNPSIWI 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02117 1283 ProSitePatterns Tyrosine protein kinases specific active-site signature. 578 590 IPR008266 GO:0004672|GO:0006468
Pste1g02117 1283 ProSiteProfiles RWD domain profile. 41 150 IPR006575 GO:0005515
Pste1g02117 1283 Coils Coil 1003 1023 - -
Pste1g02117 1283 SUPERFAMILY Class II aaRS ABD-related 1176 1273 - -
Pste1g02117 1283 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 76 770 - -
Pste1g02117 1283 FunFam eIF-2-alpha kinase GCN2 29 157 - -
Pste1g02117 1283 ProSitePatterns Protein kinases ATP-binding region signature. 429 453 IPR017441 GO:0005524
Pste1g02117 1283 Gene3D - 1174 1273 IPR036621 -
Pste1g02117 1283 MobiDBLite consensus disorder prediction 261 283 - -
Pste1g02117 1283 MobiDBLite consensus disorder prediction 1 16 - -
Pste1g02117 1283 SUPERFAMILY Protein kinase-like (PK-like) 419 758 IPR011009 -
Pste1g02117 1283 MobiDBLite consensus disorder prediction 301 324 - -
Pste1g02117 1283 Pfam Histidyl-tRNA synthetase 1003 1121 IPR041715 -
Pste1g02117 1283 ProSiteProfiles Protein kinase domain profile. 423 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02117 1283 SUPERFAMILY UBC-like 36 147 IPR016135 -
Pste1g02117 1283 Gene3D Ubiquitin Conjugating Enzyme 28 156 IPR016135 -
Pste1g02117 1283 MobiDBLite consensus disorder prediction 306 324 - -
Pste1g02117 1283 CDD STKc_EIF2AK4_GCN2_rpt2 416 723 - -
Pste1g02117 1283 Pfam Anticodon binding domain of tRNAs 1177 1275 IPR024435 -
Pste1g02117 1283 Gene3D Phosphorylase Kinase; domain 1 411 539 - -
Pste1g02117 1283 Pfam RWD domain 38 147 IPR006575 GO:0005515
Pste1g02117 1283 Pfam Protein kinase domain 423 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g02117 1283 FunFam eIF-2-alpha kinase GCN2 543 736 - -
Pste1g02117 1283 FunFam eIF-2-alpha kinase GCN2 411 539 - -
Pste1g02117 1283 Gene3D Bira Bifunctional Protein; Domain 2 785 1164 IPR045864 -
Pste1g02117 1283 FunFam Histidine--tRNA ligase, cytoplasmic 1174 1273 - -
Pste1g02117 1283 Gene3D Transferase(Phosphotransferase) domain 1 542 736 - -
Pste1g02117 1283 SUPERFAMILY Class II aaRS and biotin synthetases 791 1158 IPR045864 -
Pste1g02117 1283 MobiDBLite consensus disorder prediction 1 35 - -
Pste1g02117 1283 SMART RWD2001b 41 150 IPR006575 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02117 Pste-Chr1 6684194 6722591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02117 412 726 MAP Kinase Kinase Kinase AT1G63700 25.538 1.65e-21 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Pste1g02117 Pkinase 3.1e-48 CL0016