LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste1g02094	ATGGAGGATAGAAGTAACTGTGCTGAATGTTGGGAAAGCAACAGTGTAGATAATGGTGCTGAAAGCATGGAACAAGTAGATGAACTGGATTTAACTATGCACGATAACATGAATGGGGATTTTGAACCTTATGAGCCAGCATCGGGGATGTCATTTCCTTCCAAGGAAGCTGTTAAATCCTTTTACAGGCAGTATGCTTCTAGAATGGGATTTGGTTTCAAATTAAGAACCTCAAAAAAAGGACGTGATGGAAAGTTACATTATTTTATACTTACATGTTCACGAGAGGGAAATCGCGTGCCAAACGCTTTGAAGACATTGCCCACAATCAAGAAAAATTGTGCAGCCAAAATTACGGTTTCCTTCAGAGATGGACTGTGGTACATAATGAAAGCAGTACTTGACCACTCTCATGAACTTAGCCCTTCAAAGGCAATGATGCTCAAAGTAAAAAAAAATACGAGCATGCGCATAAACAGAACAATGGAAATCAAACATGAAGCAAAGGTGGTGATGAAGATGAACAAGACCATCCAAACACTTGCATGTGATATGGGAGGGTATGGAAATTTATCATTTGTTGAACGAGACATAAGGATTCATGTTCAGAAGGAAAGATGTACAATTGGCAAGGAAGGAGATGGTAAGGCTCTAATGAGTTATTTTTTAAGGATGCAGGAGCACAATCGTAATTTCTTCTATGATATAGATTTGGATGATTTTTTTTGTGTGAAAAATGTATTTTGGGCTGATGCAAGAAGTAGGACAACATATGATTCATTTGGAGATGTGGTTACTTTTGACACAACATATCTAACAAAAAATTATGCCATGCCATTTGTTTCAATTGTTGGGGTTAATCATCATGGACAACATGTTTTACTGGGATGTGGTCTACTTTCTAATGAAGAAACAGAGTCTTTTGTGTGGTTGTTTAAGTCATGGCTTCGTTGCATGTCAGGCAATCCTCCAAAAGGTATAGTGACTGACCAATGCAAAGAAATCCAAAATGCAATTCAGATAGTCTTCCCAACAACCCAACATAGGTGGTGCTTATGGCATATAATGAAAAAAATCCCAGAGAAGTTGAAAACAAACAATGAATATAATACGAACATAAAAAATGCCATGAAAAGTGTAGTTTATGATACCTTCACTGAAGCTGAATTTGAAGATGAATGGTATCATTTCATAAAAGAATTCAACTTGCAAGCCAATGAATGGTTGAGTGAGTTGTACAATGAGCGAAGCAGATGGGTTCCAATTTTCTTAAAGAAGGAATTTTGGGCGGGAATGTCTACCACTCAACGAGGTGAGAAGATACATTCTTTCTTTGATGGATATATCAACTCAACAACATCTTTACAACAGTTTGTTCAACTGTATGATAATGCCCTATATCGCAAGGTAGAAAAAGAATATGAAGCAGATCTGCGATCATTCAATACTACCATTCATTGTGGGTCAAATTCAATGATTGAAAAGCAATTCCAAACTGCTTATACCCATGCAAAATTTAATGAGGTGCAAGCTGAATTTAGAGCAAAAATTAATTGTTGTGTGTCCCTTAGGCATGTGGAGGGTAGCATTTGTACTTATGATGTATTGGAGGACATGATAGTTGGAGGACAACCAAAAGAAGCTAATTTTGAGGTAGTATTTCATCGTGACAATCATGATTTTATCTGCAAATGTTTATTGTTTGAGTTTAGAGGTATTATATGTAGACATTCCCTTGTTGTATTTGCACAAGAAAGGGTGAAACAAGTGCCGTCAAAGTATATCTTGCCAAGATGGAGAAAAAATATAAAACGGAGACATTCATGTACTAAGAGTAGTTATGATATGACACAATTGAAGCCACAAATCCAAAGGTATGACAATTTATGCAAGGACTTTTATGAGATAGCAGAATTTGCTGCAGAGTTTAAGGATGTTGCCCATTTCCTCCAAAATAGCTTGCATGATTTGAAAAGGAAAGTGCAATCCATGATCCACTCACAGGCCATCTAA	2013	0.3676	MEDRSNCAECWESNSVDNGAESMEQVDELDLTMHDNMNGDFEPYEPASGMSFPSKEAVKSFYRQYASRMGFGFKLRTSKKGRDGKLHYFILTCSREGNRVPNALKTLPTIKKNCAAKITVSFRDGLWYIMKAVLDHSHELSPSKAMMLKVKKNTSMRINRTMEIKHEAKVVMKMNKTIQTLACDMGGYGNLSFVERDIRIHVQKERCTIGKEGDGKALMSYFLRMQEHNRNFFYDIDLDDFFCVKNVFWADARSRTTYDSFGDVVTFDTTYLTKNYAMPFVSIVGVNHHGQHVLLGCGLLSNEETESFVWLFKSWLRCMSGNPPKGIVTDQCKEIQNAIQIVFPTTQHRWCLWHIMKKIPEKLKTNNEYNTNIKNAMKSVVYDTFTEAEFEDEWYHFIKEFNLQANEWLSELYNERSRWVPIFLKKEFWAGMSTTQRGEKIHSFFDGYINSTTSLQQFVQLYDNALYRKVEKEYEADLRSFNTTIHCGSNSMIEKQFQTAYTHAKFNEVQAEFRAKINCCVSLRHVEGSICTYDVLEDMIVGGQPKEANFEVVFHRDNHDFICKCLLFEFRGIICRHSLVVFAQERVKQVPSKYILPRWRKNIKRRHSCTKSSYDMTQLKPQIQRYDNLCKDFYEIAEFAAEFKDVAHFLQNSLHDLKRKVQSMIHSQAI	670

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste1g02094	670	Pfam	FAR1 DNA-binding domain	60	141	IPR004330	-
	Pste1g02094	670	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	38	663	IPR031052	GO:0006355
	Pste1g02094	670	ProSiteProfiles	Zinc finger SWIM-type profile.	550	586	IPR007527	GO:0008270
	Pste1g02094	670	Pfam	MULE transposase domain	264	358	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste1g02094	Pste-Chr1	6579709	6581721	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Pste1g02094		MULE	9.7e-35	CL0219