LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste1g02086	TAACCACTACCAATTTGGTACAGTTGGATGAATGTGTCTCAACGTTTACGTCCTTTGTCTTACGAGTCAGAAAAGAACATAAATGTGCAAGCCCTGCAATTTAGTAGTAACAGTTTCGGCGCCAAAGGAAACGCAGGCACAACAAGACGAACAACAGTAATAGCCATGGTGGTGGACGATCGGTTCGCCGATTTGAACCCTAAAACGTGCGTTGTTTTAGGCGGCAGAGGATTCCTCGGAAAATCGTTGGTCCTGAGGCTGTTGAAAATCGGTAACTGGATCGTCCGAGTTGCCGATTCCGCTCGGTCTCTCCAACTCCACCACTCCGAGTCTCTCCTTCAACAAGCTCTCTCTTCTGCTCGCGCTTCTTACTTCCACGTCGACCTTCGCGATAAGCACAGCATTGTCAAAGTTCTACAAGGCTCTTCTGTTGTCTTTTATATGGATGTTGCTGGCGTTGATTTGAATGACTTCTATACTTGCTATAAACTAATAGTTCAAGGTGCAAAGAATGTCATTAGTGCTTGCCGAGAATGCAGAGTGAAACGCCTCATATATAATAGTTCTGCGGATGTTGTATTTGATGGTTTGCATGATATTCATGACGAGGATGAGTCCTTGGCGTATCCGTGGAAAACCGACAACATTTTAAGTGACCTTAAGGCTCAAGCAGAAGCTTTGGTCCTGAGTGTTAATGACATTGATGGCCTATTGACATGCTCTCTTCGTCCTAGTAATGTTTTTGGACCTGGTGACACAGAATTTGTGCCTTATTTTCTCAAGTTAGCAAGATATGGTTTTGCGAAGTTTATTATAGGGACTGGTGATAATCTTTCAGACTTCACCTTTTCTGAAAATGTTACTCATGCCCATATCTGTGCAGAAGAAGCCTTAAATTTCCAAACAGTTTCTGTGGCAGGAAAGGCATTTTTCATCACGAATTTTGAGCCTATGAAATTCTGGGAATTTCTCTCGCTTTTGTTAGAAGGTCTTGGATATCAGAGGCCATTCATCAAACTTCCTTCTAAGTTGGTGCAATATATTCTATCAGTTTTAAAGTGGTTACATGACAAGTTGGGACCTAGATACTTCAGCTATCCTTTATTAATTCATTTTTTTCAGTTAGCTTCATACACCCAAACTTTCAACTGCATGGCAGCTCAGAAAGATATCAGATACTCACCAGTAGTCTCCCTTGAGGAAGGAATCACATTAACCATAGAATCATTCTCTCATTTAGCCAAAGACTCGTCTTTTTCAACATGCTGCAGTTCCACTGAAAAGTCAAAAGCAGATAAGCTGCTGGGTGGAGGAAAAGTGGCTGAGATTTTGTTGTGGAGAGACGAGAAGAAATCCTTTACATATTTCCTTGTGCTGGTTTTGTTGTTTTACTGGTTTTTCCTTTCTGGAAGAACTTTCGTATCATCAGCTGCCAGACTGATACCCACGTCTTATTTTAAGATTTCTGATACGGCAGTGAAAGATTCAGTTACAACTATAGTATATCTATGGAACAAGGGTTTTCAAAATATAAGAGGACTGGCTCAAGGGGACGATTGGTCTACATTCTTCAAGATTGCAGTTTTACTTTACTTTCTGAAGTTGATCCTGTCAGAGTTATTGACAAAAATGATAGGCATAGGTTTGGTGAGCGCATTTATGGCATTTTTTGTTTACGAGCAATACGAATCCGAAATTGATGGACTGGTGGATATACTTTTCACCAGTTTGAAGGAGTACATGATATTTTTTATGAGAATTTCACCTGTTTCTATATCGCGCCTTCTGCATCATGACAACAACTTTCAGCACGAAGGACCAAGAAAGGTAAAAGACCTGAGATAGCAAAAAAGAAGAGTTTAAGCTGCGCTCCGCGATCTTAAACCTCCATTACGCTCTCTTTTCATACCAAAAAAATTGAAAAAAAAAAGAGCTTTGTCCCATGATAAAGATAGGGAAAAATTTAATCACGTTTAGGATTGATGATCCCCCGGCGCGCTCTCTGTTCTATGTACTCACTATTCACTACTAAACTAATGAATCAGACCGAGGATGTTGCTGTTTGAAAGAGTTGTGATACTGAAACTCGTTTTAAAGTCGTGAAATATTAAGAAGCAGATTGATGGTTAATTGACAACAATAGTTATAGAAAGGGAATGTACATTTCATTCTTTAATATTAAAAAAAAAAACATGCAAAGGAAGCACGAGCTACAATATATTTAAAATTGATTATGATTCTTAAAATTGACTACGAGCAATTTTAGGCTGTCTTGGATAAAAATTTATATTAAATTTTACCTTAAAGTCAATTCTATTTAAAAGTATTCAAATATGAAGTTAAACTGTATTACTTCAAAATTAATCATGACTAAAATTAATTTTATTCATAATTAATAATGACGTTATTCTAAGTACACGGTAAACTCTACAAACATAGTGCATTATGTGCAATGAAATTTAATTTAACAAATTTTGTGTATATTCAAATAAAATATTTTATTATAATTATA	2512	0.3738	MNVSQRLRPLSYESEKNINVQALQFSSNSFGAKGNAGTTRRTTVIAMVVDDRFADLNPKTCVVLGGRGFLGKSLVLRLLKIGNWIVRVADSARSLQLHHSESLLQQALSSARASYFHVDLRDKHSIVKVLQGSSVVFYMDVAGVDLNDFYTCYKLIVQGAKNVISACRECRVKRLIYNSSADVVFDGLHDIHDEDESLAYPWKTDNILSDLKAQAEALVLSVNDIDGLLTCSLRPSNVFGPGDTEFVPYFLKLARYGFAKFIIGTGDNLSDFTFSENVTHAHICAEEALNFQTVSVAGKAFFITNFEPMKFWEFLSLLLEGLGYQRPFIKLPSKLVQYILSVLKWLHDKLGPRYFSYPLLIHFFQLASYTQTFNCMAAQKDIRYSPVVSLEEGITLTIESFSHLAKDSSFSTCCSSTEKSKADKLLGGGKVAEILLWRDEKKSFTYFLVLVLLFYWFFLSGRTFVSSAARLIPTSYFKISDTAVKDSVTTIVYLWNKGFQNIRGLAQGDDWSTFFKIAVLLYFLKLILSELLTKMIGIGLVSAFMAFFVYEQYESEIDGLVDILFTSLKEYMIFFMRISPVSISRLLHHDNNFQHEGPRKVKDLR	605

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste1g02086	605	Gene3D	-	52	405	-	-
	Pste1g02086	605	Pfam	3-beta hydroxysteroid dehydrogenase/isomerase family	62	332	IPR002225	GO:0003854\|GO:0006694\|GO:0016616
	Pste1g02086	605	PANTHER	NAD DEPENDENT EPIMERASE/DEHYDRATASE	60	325	-	-
	Pste1g02086	605	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	55	403	IPR036291	-
	Pste1g02086	605	Pfam	Reticulon	431	471	IPR003388	-
	Pste1g02086	605	Pfam	Reticulon	473	562	IPR003388	-
	Pste1g02086	605	FunFam	Reticulon-like protein	52	406	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste1g02086	Pste-Chr1	6525846	6533153	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste1g02086	60	408	Lipid Metabolism Gene Families	AT2G33630	29.333	3.95e-32	128